Table 1. Details of the raw and clean data of 24 NY and YY sample transcriptomes.
Genotypes | Tissues | Raw reads | Clean reads | Clean bases(Gb)(GC%) | Raw reads avg Q20 | |||
---|---|---|---|---|---|---|---|---|
Control | Salinity | Control | Salinity | Control | Salinity | (%) | ||
NY | Leaf | 154,357,990 | 157,905,474 | 149,840,624 | 151,807,922 | 22.48(45.27%) | 22.78(45.12%) | 97.51 |
Root | 170,983,540 | 150,144,930 | 165,732,832 | 145,221,480 | 24.86(44.06%) | 21.78(44.05%) | ||
YY | Leaf | 160,566,334 | 148,384,870 | 157,631,384 | 145,816,236 | 23.64(43.61%) | 21.88(43.54%) | |
Root | 156,290,594 | 135,742,644 | 151,681,828 | 132,426,906 | 22.76(43.47%) | 19.88(43.34%) | ||
Total | 1,234,376,376 | 1,200,159,212 (97.23%) | 180.06 |