Table 5. the list of some differentially expressed genes (DEGs) playing important roles in salinity stress.
| Gene ID | treatment vs. contral |
Log2(FC) | q_value | code protein |
gene_ length |
function |
|---|---|---|---|---|---|---|
| c127423_g2 | NYSR vs. NYCR | 4.879 | 2.20E-02 | HKT1 | 1983 | transmembrane transport//cation transport |
| c108681_g1 | YYSL vs. YYCL | 2.927 | 1.70E-02 | CIPK6 | 771 | signal transduction//protein phosphorylation |
| c119693_g1 | NYSR vs. NYCR | -4.625 | 8.15E-03 | CIPK23 | 1762 | protein phosphorylation |
| c120042_g2 | YYSL vs. YYCL | 4.023 | 1.87E-03 | CIPK6 | 1880 | protein phosphorylation//signal transduction |
| c122990_g1 | NYSL vs. NYCL | 1.752 | 2.91E-03 | CIPK25 | 812 | protein phosphorylation |
| c122990_g1 | NYSR vs. NYCR | 2.197 | 1.19E-08 | CIPK25 | 812 | protein phosphorylation |
| c122990_g1 | YYSL vs. YYCL | 1.874 | 1.00E-10 | CIPK25 | 812 | protein phosphorylation |
| c122990_g1 | YYSR vs. YYCR | 3.238 | 1.38E-84 | CIPK25 | 812 | protein phosphorylation |
| c122990_g2 | NYSL vs. NYCL | 1.802 | 5.54E-04 | CIPK25 | 1877 | signal transduction//protein phosphorylation |
| c122990_g2 | NYSR vs. NYCR | 2.079 | 1.39E-08 | CIPK25 | 1877 | signal transduction//protein phosphorylation |
| c122990_g2 | YYSL vs. YYCL | 1.850 | 1.49E-11 | CIPK25 | 1877 | signal transduction//protein phosphorylation |
| c122990_g2 | YYSR vs. YYCR | 3.182 | 4.45E-51 | CIPK25 | 1877 | signal transduction//protein phosphorylation |
| c125842_g1 | NYSR vs. NYCR | 1.844 | 4.46E-04 | CIPK10 | 2412 | protein phosphorylation//signal transduction |
| c125842_g1 | YYSL vs. YYCL | 0.777 | 3.18E-02 | CIPK10 | 2412 | protein phosphorylation//signal transduction |
| c125842_g1 | YYSR vs. YYCR | 1.939 | 2.10E-33 | CIPK10 | 2412 | protein phosphorylation//signal transduction |
| c126096_g1 | YYSR vs. YYCR | -1.437 | 6.13E-18 | CIPK7 | 1840 | protein phosphorylation//signal transduction |
| c127863_g1 | NYSR vs. NYCR | 2.126 | 1.56E-06 | CIPK2 | 3180 | signal transduction//protein phosphorylation |
| c127863_g1 | YYSL vs. YYCL | 0.720 | 2.63E-02 | CIPK2 | 3180 | signal transduction//protein phosphorylation |
| c127863_g1 | YYSR vs. YYCR | 2.506 | 2.17E-35 | CIPK2 | 3180 | signal transduction//protein phosphorylation |
| c128981_g1 | YYSL vs. YYCL | 2.357 | 7.29E-08 | CIPK25 | 2389 | signal transduction//protein phosphorylation |
| c128981_g1 | YYSR vs. YYCR | 0.514 | 3.68E-03 | CIPK25 | 2389 | signal transduction//protein phosphorylation |
| c129602_g4 | YYSR vs. YYCR | 1.752 | 1.16E-31 | CIPK6 | 1063 | protein phosphorylation |
| c129602_g5 | YYSR vs. YYCR | 1.870 | 2.16E-36 | CIPK6 | 922 | protein phosphorylation//signal transduction |
| c130525_g2 | NYSR vs. NYCR | 1.148 | 2.41E-03 | CIPK10 | 4968 | protein phosphorylation//signal transduction |
| c130525_g2 | YYSL vs. YYCL | 0.945 | 1.72E-03 | CIPK10 | 4968 | protein phosphorylation//signal transduction |
| c130525_g2 | YYSR vs. YYCR | 0.782 | 1.46E-06 | CIPK10 | 4968 | protein phosphorylation//signal transduction |
| c131066_g1 | NYSR vs. NYCR | 2.018 | 7.03E-06 | CIPK8 | 2721 | signal transduction//protein phosphorylation |
| c131066_g1 | YYSR vs. YYCR | 1.402 | 2.44E-17 | CIPK8 | 2721 | signal transduction//protein phosphorylation |
| c132458_g2 | YYSL vs. YYCL | 1.034 | 1.31E-02 | CIPK9 | 4385 | signal transduction//protein phosphorylation |
| c132458_g2 | YYSR vs. YYCR | 0.889 | 1.69E-03 | CIPK9 | 4385 | signal transduction//protein phosphorylation |
| c133247_g1 | NYSR vs. NYCR | 1.526 | 6.50E-04 | CIPK9 | 2301 | protein phosphorylation |
| c133247_g1 | YYSR vs. YYCR | 2.933 | 9.96E-05 | CIPK9 | 2301 | protein phosphorylation |
| c133300_g1 | NYSR vs. NYCR | 3.610 | 7.49E-13 | CIPK21 | 2694 | protein phosphorylation//signal transduction |
| c133300_g1 | YYSR vs. YYCR | 1.167 | 3.19E-06 | CIPK21 | 2694 | protein phosphorylation//signal transduction |
| c133961_g3 | NYSR vs. NYCR | 1.918 | 4.84E-03 | CIPK12 | 1865 | protein phosphorylation//signal transduction |
| c133961_g3 | YYSR vs. YYCR | 1.073 | 1.15E-09 | CIPK12 | 1865 | protein phosphorylation//signal transduction |
| c134486_g1 | YYSR vs. YYCR | 0.946 | 2.35E-05 | CIPK8 | 3079 | protein phosphorylation//signal transduction |
| c135536_g3 | YYSR vs. YYCR | -0.956 | 2.59E-10 | CIPK32 | 1922 | signal transduction//protein phosphorylation |
| c135536_g4 | YYSR vs. YYCR | -1.240 | 3.51E-03 | CIPK32 | 1084 | signal transduction |
| c1961_g1 | NYSR vs. NYCR | -7.549 | 3.43E-09 | CIPK23 | 1477 | protein phosphorylation//defense response to bacterium |
| c1961_g1 | YYSR vs. YYCR | -5.827 | 4.89E-05 | CIPK23 | 1477 | protein phosphorylation//defense response to bacterium |
| c246105_g1 | NYSR vs. NYCR | -4.464 | 6.58E-05 | CIPK10 | 1435 | protein phosphorylation |
| c248820_g1 | NYSR vs. NYCR | -7.544 | 7.33E-09 | CIPK30 | 1480 | protein phosphorylation |
| c248820_g1 | YYSR vs. YYCR | -5.389 | 2.20E-04 | CIPK30 | 1480 | protein phosphorylation |
| c253056_g1 | NYSR vs. NYCR | -3.329 | 3.06E-02 | CIPK11 | 1378 | — |
| c68433_g1 | NYSR vs. NYCR | -6.042 | 6.32E-09 | CIPK28 | 1701 | protein phosphorylation |
| c68433_g1 | YYSR vs. YYCR | -4.270 | 2.94E-04 | CIPK28 | 1701 | protein phosphorylation |
| c72352_g1 | NYSR vs. NYCR | -3.222 | 4.25E-02 | CIPK30 | 891 | protein phosphorylation |
| c90168_g1 | NYSL vs. NYCL | 5.569 | 9.11E-05 | CIPK13 | 1424 | protein phosphorylation |
| c129602_g4 | YYSR vs. YYCR | 1.752 | 1.16E-31 | CIPK6 | 1063 | protein phosphorylation |
| c111482_g1 | YYSR vs. YYCR | 1.401 | 1.70E-03 | LEA | 832 | response to stress//response to water stimulus |
| c135934_g2 | YYSL vs. YYCL | 3.109 | 4.97E-07 | LEA | 1218 | response to stress |
| c105006_g2 | NYSR vs. NYCR | -3.547 | 3.62E-02 | MKK5 | 1081 | protein phosphorylation |
| c122526_g1 | YYSR vs. YYCR | -1.317 | 8.13E-06 | MKK6 | 1589 | protein phosphorylation |
| c124453_g1 | NYSR vs. NYCR | 2.407 | 5.36E-06 | MKK1 | 1461 | protein phosphorylation |
| c124453_g1 | YYSL vs. YYCL | -0.738 | 2.39E-02 | MKK1 | 1461 | protein phosphorylation |
| c124453_g1 | YYSR vs. YYCR | 3.907 | 5.36E-06 | MKK1 | 1461 | protein phosphorylation |
| c126229_g1 | NYSR vs. NYCR | 2.013 | 1.44E-07 | MKK13 | 1486 | protein phosphorylation//photosynthesis |
| c126229_g1 | YYSR vs. YYCR | 0.602 | 2.14E-02 | MKK13 | 1486 | protein phosphorylation//photosynthesis |
| c132388_g1 | YYSR vs. YYCR | -0.419 | 2.31E-02 | MKK5 | 3164 | protein phosphorylation |
| c132606_g1 | YYSR vs. YYCR | 3.298 | 4.40E-51 | MKK18 | 1537 | thiamine biosynthetic process//protein phosphorylation |
| c207571_g1 | NYSR vs. NYCR | -3.932 | 2.15E-03 | MKK5 | 2599 | protein phosphorylation//oxidation-reduction process |
| c207571_g1 | YYSR vs. YYCR | -2.974 | 4.99E-02 | MKK5 | 2599 | protein phosphorylation//oxidation-reduction process |
| c226247_g1 | NYSR vs. NYCR | -3.518 | 1.49E-02 | MKK1 | 1057 | protein phosphorylation |
| c81745_g2 | NYSR vs. NYCR | -4.174 | 6.90E-03 | MKK9 | 1669 | protein phosphorylation |
| c121728_g1 | YYSR vs. YYCR | -6.603 | 7.38E-22 | NHX3 | 1516 | cation transport//regulation of pH |
| c121728_g2 | YYSL vs. YYCL | 1.810 | 2.12E-02 | NHX3 | 980 | cation transport//regulation of pH |
| c181442_g1 | NYSR vs. NYCR | -3.497 | 3.07E-02 | NHX1 | 1290 | cation transport//regulation of pH |
| c135331_g1 | YYSR vs. YYCR | 0.548 | 1.30E-03 | SOS1 | 4448 | transmembrane transport//regulation of pH |
| c135331_g1 | YYSR vs. YYCR | 0.548 | 1.30E-03 | SOS1 | 4448 | transmembrane transport//regulation of pH |