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Items investigated in this review for each pathogen
| Items | Pathogens |
|---|---|
| Genome characteristics | Escherichia coli and other Enterobacteriaceae |
| Genomic approach | Staphylococcus aureus and coagulase-negative staphylococci |
| Typing and outbreak | Streptococci and enterococci |
| Virulence | Pseudomonas aeruginosa and Acinetobacter baumannii |
| Antimicrobial susceptibility | Mycobacterium tuberculosis complex and other mycobacteria |
| Chlamydia trachomatis |
