Table 2.
Fisher’s exact test (P F) and the uncorrected χ 2 test (P χ 2) of known drug target proteins regarding the inference of the present study.
Single Gene Perturbations from GEO up | Single Gene Perturbations from GEO down | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
F | T | P F | P χ 2 | RO | F | T | P F | P χ 2 | RO | ||
heart failure | F | 521 | 517 | 3.4 × 10−4 | 3.9 × 10−4 | 3.02 | 628 | 416 | 1.3 × 10−3 | 7.3 × 10−4 | 2.61 |
T | 13 | 39 | 19 | 33 | |||||||
PTSD | F | 500 | 560 | 3.8 × 10−2 | 3.1 × 10−2 | 2.67 | 532 | 529 | 6.1 × 10−3 | 4.5 × 10−3 | 3.81 |
T | 6 | 18 | 5 | 19 | |||||||
ALL | F | 979 | 89 | 2.7 × 10−1 | 3.0 × 10−1 | 2.19 | 1009 | 57 | 1.0 × 100 | — | — |
T | 10 | 2 | 12 | 0 | |||||||
diabetes | F | 889 | 177 | 1.2 × 10−2 | 7.1 × 10−3 | 3.00 | 936 | 130 | 3.6 × 10−4 | 2.0 × 10−5 | 5.13 |
T | 15 | 9 | 14 | 10 | |||||||
renal carcinoma | F | 847 | 219 | 2.0 × 10−2 | 1.2 × 10−2 | 2.75 | 895 | 169 | 4.3 × 10−2 | 2.2 × 10−2 | 2.64 |
T | 14 | 10 | 16 | 8 | |||||||
cirrhosis | F | 572 | 219 | 1.1 × 10−2 | 8.1 × 10−3 | 2.91 | 595 | 169 | 1.6 × 10−3 | 1.1 × 10−3 | 3.81 |
T | 8 | 10 | 7 | 8 |
Rows: known drug target proteins (DINIES). Columns: Inferred drug target proteins using ‘Single Gene Perturbations from GEO up’ or ‘Single Gene Perturbations from GEO down’. OR: odds ratio.