Table 7.
The LncRNAs or snRNAs proximate to the replicated risk genes for AD
| LncRNA name (NCBI Gene) | Alias | Length (nt) | Distance to risk gene | Category |
|---|---|---|---|---|
| XR_948110.2 | LOC105369536 | 13,932 | Overlap with exons 1&2 of SORL1 | antisense LncRNA |
| XP_016874140.1 | LOC105369535 | 11,887 | Covered by SORL1 | antisense LncRNA |
| XR_944153.1 | LOC105370627 | 15,237 | 2,931bp to TSS of SLC24A4 | sense LincRNA |
| XR_001753982.1 | LOC107985327 | 31,013 | 148bp to 3′ of CD33 | antisense LncRNA |
| XR_923311.2 | LOC105373605 | 29,009 | 99bp to 3′ of BIN1 | antisense LncRNA |
| NC_000011.10 | RNU6-560P | 108 | 83,453bp to TSS of PICALM | snRNA |
Sense, LncRNAs are transcribed from the same genomic strand as the protein-coding mRNAs; Antisense, LncRNAs are transcribed from the antisense strand.