Table 3. Differentially expressed anti-sense lncRNAs.
| Genecode | Alternate IDs | Anti-Sense Gene | Multi-exonic | Position (GRCh37/hg19) |
|---|---|---|---|---|
| LOC101928370 | RP4-575N6.1 | S1PR1 | YES | chr1: 101701238-101702084 |
| LINC00883 | DUBR | LINC00882 | YES | chr3: 106959538-107045811 |
| LINC00312 | LINC00312 | LMCD1 | NO | chr3: 8613467-8634810 |
| LHFPL3-AS2 | RP11-325F22.5 | LHFPL3 | YES | chr7: 104558006-104567077 |
| FEZF1-AS1 | FEZF1-AS1 | FEZF1 | YES | chr7: 121945003-121945871 |
| HSPC324 | RP11-251M1.1 | EGFL7 | YES | chr9: 139541826-139554873 |
| LOC105369340 | RP11-783K16.5 | PPP1R14B | YES | chr11: 64014525-64015649 |
| LOC101929340 | RP11-677M14.3 | ESAM | YES | chr11: 124632326-124635257 |
| SBK1-AS1 | RP11-57A19.2 | SBK1 | YES | chr16: 28270020-28303385 |
| FENDRR | FENDRR | FOXF1 | YES | chr16: 86508050-86542705 |
| TBX2-AS1 | RP11-332H18.5 | TBX2 | YES | chr17: 59470732-59477096 |
| RP11-720L2.4 | COLEC2 | YES | chr18: 314886-319165 | |
| GATA6-AS1 | GATA6-AS1 | GATA6 | YES | chr18: 19746858-19748929 |
| LINC01271 | RP11-290F20.2 | LINC01270 | YES | chr20: 48909256-48937879 |
| LINC00649 | LINC00649 | ATP5O | YES | chr21: 35295736-35351160 |
The Gencode annotation for each lncRNA is indicated, along with the genomic coordinates of the lncRNA and the mRNA that is transcribed in the antisense orientation. All but LINC00312 are multi-exonic, indicative of splicing. The hg19-based lncRNA coordinates are listed.