. Author manuscript; available in PMC: 2017 Oct 25.

Published in final edited form as: Ann Appl Stat. 2017 Oct 5;11(3):1810–1831. doi: 10.1214/17-AOAS1062

Table 2.

Annotated names of 22 primary genes and 85 secondary genes in the M2c module, listed in the descending order of leverage. The 6 underlined genes are also significant in the differential expression analysis

	Gene names
Primary genes	ABHD2 SLC23A2 LRRC55 CRKL ZBTB24 TUBGCP3 KCTD10 USP13 MORC2-AS1 REXO2 HEXIM1 TOX3 FNIP2 WBP11 SYT11 SMAD3 SLC36A4 SNX30 PCDHB12 PURB TGOLN2 OSBP
Secondary genes	SH3RF1 IMPAD1 SYNM HECW2 ANO1 DNM3 STOX2 C1orf173 PPM1L DNAJC6 DLG2 LRRTM4 ANK3 EIF4G3 ANK2 ITSN1 SLIT2 LRRTM3 ATP8A2 CNTNAP2 CKAP5 GNPTAB USP32 USP9X ADAM23 SYNPO2 AKAP11 MAP1B KIAA1244 PPP1R12B SLC24A2 PTPRK SATB1 CAMTA1 MFSD6 KIAA1279 NTNG1 RYR2 RASAL2 PUM1 STAM ST8SIA3 ZKSCAN2 PBX1 ARHGAP24 RASA1 ANKRD17 MYCBP2 SLITRK1 BTRC MYH10 AKAP6 NRCAM MYO5A TRPC5 NRXN3 CACNA2D1 DNAJC16 GRIN2A KCNQ5 NETO1 FTO THRB NLGN1 HSPA12A BRAF OPRM1 KIAA1549L NOVA1 OPCML CEP170 DLGAP1 JPH1 LMO7 PCNX SYNJ1 RAPGEF2 NIPAL2 SYT1 UNC80 ATP8A1 SHROOM2 KCNJ6 SNAP91 WDR7

Gene names

Primary genes

ABHD2 SLC23A2 LRRC55 CRKL ZBTB24 TUBGCP3 KCTD10 USP13 MORC2-AS1 REXO2 HEXIM1 TOX3 FNIP2 WBP11 SYT11 SMAD3 SLC36A4 SNX30 PCDHB12 PURB TGOLN2 OSBP

Secondary genes

SH3RF1 IMPAD1 SYNM HECW2 ANO1 DNM3 STOX2 C1orf173 PPM1L DNAJC6 DLG2 LRRTM4 ANK3 EIF4G3 ANK2 ITSN1 SLIT2 LRRTM3 ATP8A2 CNTNAP2 CKAP5 GNPTAB USP32 USP9X ADAM23 SYNPO2 AKAP11 MAP1B KIAA1244 PPP1R12B SLC24A2 PTPRK SATB1 CAMTA1 MFSD6 KIAA1279 NTNG1 RYR2 RASAL2 PUM1 STAM ST8SIA3 ZKSCAN2 PBX1 ARHGAP24 RASA1 ANKRD17 MYCBP2 SLITRK1 BTRC MYH10 AKAP6 NRCAM MYO5A TRPC5 NRXN3 CACNA2D1 DNAJC16 GRIN2A KCNQ5 NETO1 FTO THRB NLGN1 HSPA12A BRAF OPRM1 KIAA1549L NOVA1 OPCML CEP170 DLGAP1 JPH1 LMO7 PCNX SYNJ1 RAPGEF2 NIPAL2 SYT1 UNC80 ATP8A1 SHROOM2 KCNJ6 SNAP91 WDR7