Table 1. Affinity of Triazine and Pyrimidine Core-Containing Molecules to PI3K and PI3K-Related Kinases.
binding constant Kd [nM]a |
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compd | PI3Kα | PI3Kβ | PI3Kγ | PI3Kδ | mTOR | PI3KC2β | VPS34 | PI4KCβ | DNAPK | mTOR/PI3Kα |
1 | 1.5 | 11 | 25 | 25 | 12 | 820 | 230 | 40000 | 1600 | 8.0 |
2 | 1.2 | 3.5 | 11 | 3.5 | 61 | 540 | 130 | 27000 | >30000 | 51 |
3 | 1.0 | 3.5 | 24 | 76 | 0.94 | 0.46 | 5100 | >30000 | >30000 | 0.94 |
4 | 3.5 | 36 | 130 | 260 | 19 | 2100 | 200 | 40000 | 1800 | 5.4 |
5 | 0.76 | 2.1 | 7.7 | 3.3 | 48 | 40 | nd | 40000 | 1300 | 63 |
6 | 0.62 | 3.8 | 2.6 | 3.3 | 3.3 | 580 | 250 | >30000 | 9800 | 5.3 |
IC50, kinase assay [nM]b |
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compd | PI3Kα | PI3Kβ | PI3Kγ | PI3Kδ | mTOR | α542K/545K/1047Rc | VPS34 | DNAPK | mTOR/PI3Kα | |
1 | 33 | 661 | 708 | 451 | 89 | 63/136/36 | 8486 | 8567 | 2.6 | |
4 | 45 | 607 | 778 | 110 | 94 | 111/216/87 | 2581 | 6917 | 13 |
Dissociation constants (Kd) were determined using ScanMax technology (DiscoveRx) 26with 11-point 3-fold serial dilutions of the indicated compounds. Kd is the mean value from experiments performed in duplicate and calculated from standard dose–response curves using the Hill equation depicted in Experimental Section (n ≥ 2). A TreeSpot representation of a full kinase panel and kinase residual binding values are shown in Supporting Information Figure S1 and Table S2 for all above compounds except compound 2.
Prokinase activity assays of the indicated enzymes and PI3Kα mutants.
Inhibition of PI3Kα E542K, E545K, and H2047R mutant activities are indicated. For these values, the wild type PI3Kα reference IC50 values were 122 nM for 1 and 142 nM for 4.