Table 1. List of 23 DE bovine miRNAs in IMF tissues between steers and bulls and the identification results of miRNA family.
| Bovine miRNA | Log2FC (steers /bulls) |
FDR | Mature Sequence | Seed Region of miRNA Family (3’-5’) | Human miRNA |
|---|---|---|---|---|---|
| bta-miR-6526 | 4.758 | 4.37E-04 | tcctgtgcctcgaatgggtatg | CCUGUGC | hsa-miR-1914-5p |
| bta-miR-2890 | 4.591 | 6.33E-03 | gccccggccgctcccggcct | CCCCGGC | hsa-miR-4707-5p |
| bta-miR-2305 | 3.245 | 3.75E-04 | cgggggtggcggggaggggg | GGGGGUG | hsa-miR-6752-5p |
| bta-miR-193a-3p | 1.887 | 0.04 | aactggcctacaaagtcccagt | ACUGGCC | hsa-miR-193a-3p |
| bta-miR-192 | 1.436 | 4.96E-06 | ctgacctatgaattgacagccag | UGACCUA | hsa-miR-192-5p |
| bta-miR-1247-3p | 1.311 | 2.66E-03 | cgggaacgtcgggactggagc | GGGAACG | hsa-miR-1292-5p |
| bta-miR-151-3p | 1.251 | 3.91E-05 | ctagactgaagctccttgagg | UAGACUG | hsa-miR-151a-3p |
| bta-miR-6120-3p | 1.152 | 3.65E-06 | tatgttggacaacgtggatagc | AUGUUGG | hsa-miR-4781-3p |
| bta-let-7i | 1.071 | 5.12E-05 | tgaggtagtagtttgtgctgtt | GAGGUAG | hsa-let-7a-5p |
| bta-miR-141 | -2.097 | 0.03 | taacactgtctggtaaagatgg | AACACUG | hsa-miR-141-3p |
| bta-miR-224 | -1.921 | 6.82E-04 | caagtcactagtggttccgttta | AAGUCAC | hsa-miR-224-5p |
| bta-miR-454 | -1.481 | 0.01 | tagtgcaatattgcttatagggt | AGUGCAA | hsa-miR-130a-3p |
| bta-miR-362-5p | -1.422 | 0.01 | aatccttggaacctaggtgtgagt | AUCCUUG | hsa-miR-362-5p |
| bta-miR-150 | -1.117 | 0.04 | tctcccaacccttgtaccagtgt | CUCCCAA | hsa-miR-150-5p |
| bta-miR-296-5p | -1.090 | 1.37E-03 | gagggccccccccaatcct | AGGGCCC | hsa-miR-7160-3p |
| bta-miR-1296 | -1.039 | 4.31E-03 | ttagggccctggctccatctcc | UAGGGCC | hsa-miR-1296-5p |
| bta-miR-2427 | 2.341 | 2.56E-03 | aggtcatttcaaagagggctg | GGUCAUU | / |
| bta-miR-2285z | 1.406 | 2.83E-08 | ccagaaagttcattcaggtcct | CAGAAAG | / |
| bta-miR-502b | 1.398 | 5.20E-09 | aatccacctgggcaaggattc | AUCCACC | / |
| bta-miR-2285t | 1.192 | 4.93E-04 | agaatctggatgaactttttgg | GAAUCUG | / |
| bta-miR-2285q | 1.156 | 4.53E-02 | aaggacctgaatgaactttctgg | AGGACCU | / |
| bta-miR-2483-5p | -1.869 | 7.83E-03 | cgtcaaccatccagctgtttga | GUCAACC | / |
| bta-miR-2885 | -1.083 | 0 | cggcggcagcgccggggcg | GGCGGCA | / |
Note: FC, Fold Change, FDR, False Discovery Rate. Differentially Expressed (DE) miRNAs were identified according to the following criteria: |log2(FC)|>1 and FDR<0.05.