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. 2017 Oct 26;12(10):e0186279. doi: 10.1371/journal.pone.0186279

Table 1. Summary of sequencing data utilized in this study.

Sample Clean Reads HQ Clean reads Clean Base Total mapped Total mapped Ratio (%) Unique Match(%) Known Gene New Gene All Gene
YCCZ1 41009930 40623584 6062919977 11603568 70.23 70.12 8586 (88.96%) 668 9254
YCCZ2 59291792 58701420 8755948868 11607702 70.30 70.17 8735 (90.51%) 705 9440
YCCZ3 47879596 47274196 7052765933 14351858 69.17 69.04 8714 (90.29%) 699 9413
YCCZ4 56986574 56336928 8406700715 16735019 69.68 69.54 8745 (90.61%) 704 9449
YCCZ5 52911126 52298678 7800954755 15641003 69.90 69.77 8700 (90.15%) 702 9402
YCCZ6 60630086 60093188 8971315366 17870079 69.05 68.89 8746 (90.62%) 699 9445

Note: Clean Reads = Raw Reads—Adapter—Low Quality–High N rate

HQ Clean Reads = Raw Reads—Clean Reads

Known Gene Percentage = number of detected / total genes in reference genome.