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. 2017 Oct 26;15:96. doi: 10.1186/s12915-017-0435-x

Table 1.

Oligonucleotide primers used to amplify and sequence the rbcL, matK, and ITS markers and their associated PCR thermocycling regimes

Marker Primer Source PCR conditions
rbcL aF Pryer et al., 2001 [55] 5 min of initial denaturation at 80 °C; 30 cycles: 95 °C 1 min, 60 °C 1 min, 65 °C 2 min; final extension 5 min
1379R Pryer et al., 2001 [55]
matK matK-xf Ford et al., 2009 [56] 5 min of initial denaturation at 95 °C; 35 cycles: 95 °C 30 s, 49 °C 1 min, 72 °C 1 min 40 s; final extension 7 min
matK-MALP Dunning and Savolainen, 2010 [57]
ITS ITS5a Stanford et al., 2000 [58] 6 min of initial denaturation at 95 °C; 35 cycles: 95 °C 30 s, 49 °C 1 min, 72 °C 1 min 40 s; final extension 7 min
ITS4 White et al., 1990 [59]