Table 3.
The conserved binding sites of miR‐1249 in the PB2 gene compared across a selection of influenza viral strainsa
| Virus type and NCBI sequence no. | Sequenceb |
|---|---|
| H1N1 CY115917 | AGGGGTATGAGGAATTCACAATGGTTGGGAGGAGGGCAACAGCTATCCTGA |
| H1N2 KF013909 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATACTGA |
| H2N3 KC899708 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATTCTGA |
| H3N8 JN029578 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATTCTGA |
| H4N6 FJ349254 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H5N1 HM006756 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H5N3 EF597473 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H6N1 KC785023 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H6N6 HM804480 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H7N1 CY005500 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H7N9 KC609823 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATTCTGA |
| H9N2 CY024237 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H9N2 EF154862 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
| H11N9 CY146609 | AGGGGTATGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATTCTGA |
| H13N2 JF965054 | AAGGGTACGAGGAATTCACAATGGTTGGGCGGAGGGCAACAGCTATCCTGA |
a
Collected from NCBI 29 November 2016.
b
Underlined sequences indicate conserved miR‐1249 binding sites. Some influenza viruses are not shown in the table. The mutations were shown in red colour.