Table 2.
Group | CNVR | Chr | Start | End | V i -North | V i -Northwest | V i -Southwest | V i -South | Candidate Genes |
---|---|---|---|---|---|---|---|---|---|
Shared | 208 | 1 | 150050992 | 150065547 | 9.11 | 5.90 | 7.03 | 14.76 | CBR1 |
2451 | 17 | 72870233 | 72941663 | 7.96 | 6.36 | 8.65 | 8.91 | IGLL1,LOC100297192 | |
2872 | 22 | 48265166 | 48280157 | 4.22 | 4.78 | 5.07 | 5.02 | TKT | |
North | 93 | 1 | 44683130 | 44743553 | 4.89 | 4.02 | 1.67 | 0.74 | EFHB |
114 | 1 | 58435550 | 58449521 | 4.97 | 2.37 | 2.20 | 0.44 | BOC | |
134 | 1 | 83760081 | 83775860 | 4.99 | 3.34 | 1.77 | 1.00 | ABCC5 | |
375 | 3 | 1667959 | 1704027 | 5.24 | 1.80 | 2.44 | 0.73 | DUSP27 | |
1105 | 7 | 16054798 | 16073843 | 7.66 | 1.65 | 2.65 | 1.12 | FDX1L,ICAM5,RAVER1 | |
1360 | 8 | 105256615 | 105273649 | 4.44 | −0.95 | 3.10 | 0.82 | COL27A1 | |
1686 | 11 | 38648841 | 38851335 | 4.32 | 2.85 | 3.07 | 1.60 | CCDC85A | |
2153 | 15 | 17038087 | 17074274 | 4.00 | 0.51 | 1.85 | 4.88 | GUCY1A2 | |
2614 | 19 | 54639709 | 54648592 | 4.42 | −0.06 | 2.58 | 0.52 | TMC6 | |
3163 | 27 | 5444267 | 5973102 | 5.60 | −0.88 | 1.76 | 0.01 | DEFB,DEFB1,DEFB5,EBD | |
Northwest | 76 | 1 | 36710870 | 36729816 | 2.72 | 5.52 | 1.56 | 1.51 | EPHA3 |
216 | 1 | 157196044 | 157225181 | 0.53 | 5.44 | 1.17 | 2.31 | SATB1 | |
604 | 4 | 46975403 | 46982930 | 2.77 | 6.81 | 0.97 | 2.12 | ATXN7L1 | |
870 | 5 | 119430708 | 119531892 | −0.77 | 5.15 | 2.13 | −0.95 | FAM19A5 | |
1759 | 11 | 104195124 | 104384812 | −1.18 | 4.90 | 2.74 | −1.26 | ABO,MED22,RPL7A,SURF4,SURF6 | |
1961 | 13 | 16187783 | 16193492 | 3.24 | 5.43 | 2.73 | 2.86 | KIN | |
2175 | 15 | 42588302 | 42594246 | 3.08 | 6.40 | 2.71 | 2.71 | MRVI1 | |
2176 | 15 | 42639417 | 42644258 | 2.65 | 7.25 | 3.14 | 3.29 | MRVI1 | |
2257 | 16 | 933282 | 950232 | 2.28 | 4.89 | 1.88 | 1.96 | FMOD | |
2420 | 17 | 43069432 | 43085729 | −1.14 | 5.01 | 2.17 | 1.08 | GLRB | |
2595 | 19 | 41945417 | 41951980 | 0.89 | 4.86 | 2.42 | 2.41 | LOC618938 | |
3329 | 29 | 37219773 | 37404822 | −0.72 | 4.88 | 2.00 | 0.41 | MIR584-7 | |
Southwest | 990 | 6 | 71630923 | 72077236 | 2.09 | 2.75 | 3.40 | 4.49 | KIT |
1171 | 7 | 64638445 | 64705407 | 0.17 | 0.78 | 3.78 | 4.51 | FAT2,SLC36A1 | |
2517 | 18 | 60990841 | 61031513 | 3.12 | 2.86 | 4.19 | 4.62 | ZNF331 | |
3341 | 29 | 45491233 | 45608617 | 0.57 | −0.68 | 4.11 | 0.56 | LRFN4,MIR2408,PC,RCE1 | |
South | 190 | 1 | 130623810 | 130626113 | 3.11 | 1.21 | 2.26 | 5.14 | KPNA6 |
507 | 3 | 118059058 | 118090512 | 1.51 | −0.50 | 1.52 | 6.66 | ESPNL,SCLY | |
2182 | 15 | 46571384 | 47009702 | 1.33 | 0.08 | 2.31 | 7.71 | LOC100125776,LOC506989,LOC530354,MRPL17 | |
2618 | 19 | 56993243 | 57020892 | 1.97 | −0.68 | 1.35 | 6.63 | ATP5H |
Candidate genes were defined as the genes overlapping with CNVR.