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. 2017 Oct 31;9:92. doi: 10.1186/s13073-017-0480-7

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — UK-ST313 isolates are phylogenetically distinct from African lineages. Unrooted maximum likelihood phylogeny of ST313 in the context of reference S. Typhimurium ST19 isolates. Isolate U21 was an ST19 isolate, closely related to ST313, that was used as an outgroup in further analyses. The African epidemic ST313 lineages 1 and 2 are labelled