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. 2017 Jul 6;8(48):83354–83369. doi: 10.18632/oncotarget.19042

Table 2. Similarities and differences between DEG in BM-MSC from mice engrafted with either MLL/ENL+FLT3-ITD Trp53-/- or MLL/ENL+FLT3-ITD Trp53 wt.

MLL/ENL+FLT3-ITD Trp53-/- MLL/ENL+FLT3-ITD Trp53 wt
Similarities:
Activation of β-Catenin
Genes up-regulated in HSC
Activation of β-Catenin
Genes up-regulated in HSC
Differences:
Hypoxia
Activation of MYC
Mitochondrial functions, ribosome assembly, RNA translation and RNA metabolic functions
Activation of C-Rel and NRF2
Inhibition of PI3K, PLC, TGF-β
Activation of AHR
Activation of TATA
Collagen formation
Activation of Polo-like kinase, Integrins, mTOR and NGF
Inhibition of IL-8, IL-6, cytokines production, NFAT-mediated regulation of immune response, TLR-mediated signaling and Rho family of GTPases

Summary of changes in GEP observed in BM-MSC under the two experimental conditions. GSEA and IPA were used as analysis tools to determine similarities and differences presented.