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. 2017 Oct 31;7:14468. doi: 10.1038/s41598-017-14791-1

Table 1.

Relevant whole genome sequencing information of six XDR isolates characterized in this study.

Characteristics E. coli (EPEC) S. flexneri P. aeruginosa S. Typhimurium K. pneumoniae P. stuartii
Strain ID MV292587 IDH07210 MV36846 MV32691 MV36808 MV493
Sequence size (Mb) 430 207 303 363 390 429
No. of reads 592054 428839 490091 563297 553858 586289
Avg. read lengths (bp) 727 483 620 646 704 732
No. of scaffolds 61 307 65 29 93 76
GC content (%) 50.5 50.5 66.3 52.2 56.6 41.0
Mean seq. size 48264.3 5769.2 56033.5 68477.5 33376.8 62370.5
Longest scaffold size (bp) 541956 75239 591202 667925 365674 278521
Total number of ORF 5429 4664 6117 4817 5767 4597
ORFs encode Virulence, toxin and AMR 128 116 145 121 136 29
Phage, Tn, plasmids 150 42 8 25 113 41