Table 1.
Number of genes and sites in each dataset supporting alternative hypotheses of the sister lineage to all other metazoans.
| Dataset1 | Genes supporting Ctenophora-sister |
Genes supporting Porifera-sister |
Sites supporting Ctenophora-sister |
Sites supporting Porifera-sister |
|---|---|---|---|---|
| Metazoa_full | 144 (64.3%) | 80 (35.7%) | 38,378 (56.4%) | 29,684 (43.6%) |
| Metazoa_RCFV_relaxed | 133 (64.8%) | 72 (35.2%) | 36,255 (55.5%) | 29,072 (44.5%) |
| Metazoa_RCFV_strict | 70 (60.3%) | 46 (39.7%) | 22,897 (52.9%) | 20,415 (47.1%) |
| Metazoa_LB_relaxed | 112 (68.3%) | 52 (31.7%) | 28,642 (55.9%) | 22,554 (44.1%) |
| Metazoa_LB_strict | 105 (69.5%) | 46 (30.5%) | 25,875 (55.1%) | 21,071 (44.9%) |
| Metazoa_RCFV_LB_relaxed | 97 (65.1%) | 52 (34.9%) | 26,647 (54.3%) | 22,389 (45.7%) |
| Metazoa_RCFV_LB_strict | 53 (71.6%) | 21 (28.4%9 | 15,194 (52.8%) | 13,558 (47.2%) |
| Metazoa_Choano | 144 (61.5%) | 90 (38.5%) | 41,971 (55.3%) | 33,850 (44.7%) |
| Metazoa_Choano_RCFV_relaxed | 111 (68.9%) | 50 (31.3%) | 32,434 (54.3%) | 27,247 (45.7%) |
| Metazoa_Choano_RCFV_strict | 87 (68.5%) | 40 (31.5%) | 27,257 (55.2%) | 22,131 (44.8%) |
| Metazoa_Choano_LB_relaxed | 104 (56.8%) | 79 (43.2%) | 33,268 (54.8%) | 27,417 (45.2%) |
| Metazoa_Choano_LB_strict | 156 (75.4%) | 51 (32.7%) | 29,875 (59.2%) | 20,595 (40.8%) |
| Metazoa_Choano_RCFV_LB_relaxed | 83 (63.8%) | 47 (36.2%) | 26,586 (54.2%) | 22,493 (45.8%) |
| Metazoa_Choano_RCFV_LB_strict | 56 (68.3%) | 26 (31.7%) | 17,873 (57.3%) | 13,334 (42.7%) |
1
See Supplementary Table S3 for more information on datasets.