Table 2B.
Functional Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway classification of predicted genes in SA187.
| KEGG pathway functional class | CDS | % of CDS |
|---|---|---|
| Metabolism | ||
| – Carbohydrate metabolism | 341 | 7.84 |
| – Lipid metabolism | 63 | 1.45 |
| – Nucleotide metabolism | 99 | 2.28 |
| – Amino acid metabolism | 184 | 4.23 |
| – Metabolism of other amino acids | 64 | 1.47 |
| – Glycan biosynthesis and metabolism | 49 | 1.13 |
| – Metabolism of cofactors and vitamins | 168 | 3.86 |
| – Metabolism of terpenoids and polyketides | 44 | 1.01 |
| – Biosynthesis of other secondary metabolites | 27 | 0.62 |
| – Xenobiotic biodegradation and metabolism | 30 | 0.69 |
| Genetic information processing | ||
| – Transcription | 159 | 3.66 |
| – Translation | 230 | 5.29 |
| – Folding, sorting and degradation | 52 | 1.20 |
| – Replication and repair | 88 | 2.02 |
| Environmental information processing | ||
| – Membrane transport: ABC Transporters | 259 | 5.96 |
| – Membrane transport: Phosphotransferase system (PTS) | 71 | 1.63 |
| – Membrane transport: Bacterial secretion system | 35 | 0.81 |
| – Signal transduction: Two-component system | 119 | 2.74 |
| Cellular processes | ||
| – Cellular community: Quorum sensing | 75 | 1.73 |
| – Cellular community: Biofilm formation | 94 | 2.16 |
| – Cell motility: Bacterial chemotaxis | 36 | 0.83 |
| – Cell motility: Flagellar assembly | 72 | 1.66 |
| Poorly characterized | ||
| Unclassified | 453 | 10.42 |