Table 3.

Selected differentially down-regulated genes and their functions in S. Typhi biofilm cells

Gene	Gene function	Log2-fold change	p-value	q-value
STY1856	Regulatory protein	−2.07402	5.00E-05	0.001837
yiiU	FtsZ stabilizer	−2.10309	5.00E-05	0.001837
cspB	Cold shock protein	−2.18312	5.00E-05	0.001837
STY0398	Propionate catabolism operon regulatory protein	−2.29804	5.00E-05	0.001837
STY0788	Hypothetical protein	−2.35255	5.00E-05	0.001837
osmE	Osmotically inducible lipoprotein E	−2.36034	5.00E-05	0.001837
tatE	Sec-independent protein translocase protein TatE	−2.41698	5.00E-05	0.001837
ompX	Outer membrane protein X	−2.45886	2.00E-04	0.005683
yaiA	Hypothetical protein	−2.48198	5.00E-05	0.001837
hupA	Histone like DNA-binding protein HU-alpha	−2.59176	5.00E-05	0.001837
STY1982	Hypothetical protein	−2.61628	5.00E-05	0.001837
STY1323	Hypothetical protein	−2.67081	5.00E-05	0.001837
ompC	Outer membrane protein C	−2.75117	5.00E-05	0.001837
lppA	Major outer membrane lipoprotein	−2.93078	5.00E-05	0.001837
STY1938	Hypothetical protein	−3.30784	5.00E-05	0.001837
rpsV	30S ribosomal protein S22	−3.30884	5.00E-05	0.001837
yjfO	Biofilm stress and motility protein A	−3.3313	5.00E-05	0.001837
cspC	Cold shock-like protein CspC	−3.34324	5.00E-05	0.001837
STY2264	Hypothetical protein	−3.38655	5.00E-05	0.001837
dps	DNA protection during starvation protein	−3.42148	5.00E-05	0.001837
STY4154	DNA-binding protein	−3.45538	0.00085	0.015693
ecnB	Entericidin B	−3.5082	5.00E-05	0.001837
STY0800	Hypothetical protein	−3.80587	5.00E-05	0.001837
STY1854	Hypothetical protein	−4.01921	5.00E-05	0.001837
cspE	Cold shock-like protein CspE	−4.36039	5.00E-05	0.001837
STY4436	Hypothetical protein	−4.50574	5.00E-05	0.001837
STY0893	Biofilm formation regulatory protein bssr	−5.12497	5.00E-05	0.001837
rmf	Ribosome modulation factor	−6.30581	5.00E-05	0.001837