Table 2.
BLAST sequence results from different assemblers in four taxa: Brunonia australis, Coopernookia polygalacea, Diaspasis filifolia, and Goodenia decursiva. Results from four gene clades: CYC1 - CYC2 - CYC3A - CYC3B.a
| Taxon | Trinity | SOAPdenovo-Trans | SOAPdenovo-25 | SOAPdenovo-31 | SOAPdenovo-63 | SPAdes merged |
| Brunonia australis | 0 - 0 - 0 - 0 | 0 - 0 - 0 - 0 | 0 - 100 - 100 - 100 | 0 −100 - 100 −100 | 0 - 0 - 0 - 0 | NA |
| Coopernookia polygalacea | 800 - 719(2) - 289 - 466 | 0 - 234 - 100 - 0 | 553 - 501(2) - 0 - 0 | 411 - 193 - 100 - 0 | 196 - 0 - 0 - 0 | 527 - 357 - 0 - 0 |
| Diaspasis filifolia | 715(2) - 859 - 529;289 - 449 | 895 - 130 - 0 - 0 | 100 - 100 - 187 - 194 | 100;476 - 130 - 118 - 194 | 0 - 0 - 0 - 0 | 0 - 0 - 0 - 0 |
| Goodenia decursiva | 1384 - 989 - 669 - 1348 | 876 - 775 - 144 - 894;429 | 349 - 274 - 0 - 657;429 | 666(2) - 293(2) - 0 - 268;764 | 0 - 0 - 0 - 281 | 0 - 0 - 0 - 0 |
Note: NA = not available.
a
Numbers represent sequence lengths recovered in BLAST searches. Semicolons separate multiple gene copies from a single gene group. Parentheses note that the sequence was broken between nonoverlapping sequences.