Table 1.
Variant rate of the single base substitutions and small INDELs across each chromosome in the 11 re-sequenced lines.
| Line | Chromosome 1 | Chromosome 2 | Chromosome 3 | Chromosome 4 | Chromosome 5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Variantsa | Rateb | Variants | Rate | Variants | Rate | Variants | Rate | Variants | Rate | |
| C7 | 17 | 1789863 | 9 | 2188699 | 10 | 2345983 | 8 | 2323132 | 13 | 2075039 |
| C116 | 7 | 4346810 | 10 | 1969829 | 9 | 2606648 | 10 | 1858506 | 10 | 2697550 |
| C197 | 6 | 5071279 | 9 | 2188699 | 8 | 2932479 | 4 | 4646264 | 8 | 3371938 |
| C352 | 5 | 6085534 | 3 | 6566096 | 3 | 7819943 | 8 | 2323132 | 1 | 26975502 |
| C357 | 14 | 2173405 | 6 | 3283048 | 11 | 2132712 | 3 | 6195019 | 9 | 2997278 |
| C541 | 7 | 4346810 | 5 | 3939658 | 3 | 7819943 | 0 | / | 11 | 2452318 |
| C600 | 10 | 3042767 | 10 | 1969829 | 9 | 2606648 | 12 | 1548755 | 18 | 1498639 |
| C828 | 2 | 15213836 | 5 | 3939658 | 2 | 11729915 | 1 | 18585056 | 3 | 8991834 |
| C941 | 13 | 2340590 | 9 | 2188699 | 8 | 2932479 | 16 | 1161566 | 11 | 2452318 |
| C1001 | 8 | 3803459 | 3 | 6566096 | 2 | 11729915 | 8 | 2323132 | 5 | 5395100 |
| C1322 | 10 | 3042767 | 10 | 1969829 | 9 | 2606648 | 11 | 1689551 | 22 | 1226159 |
a
Variants indicate the number of mutations in each chromosome.
b
Rate equals to length of chromosome/variants. Length (bp) of chromosome 1 to 5 is 30427671, 19698289, 23459830, 18585056, and 26975502, respectively.