Table 4.
Noteworthy DEGs and metabolic pathways related to Cd uptake, transportation and detoxification.
| Unigenes ID | Log2FC | Description |
|---|---|---|
| Metal transporter | ||
| c69105_c0 | 9.44 | ABC transporter A family member 7 |
| c84507_c0 | 8.64 | Zinc transporter 5 |
| c65267_c0 | 8.04 | ABC transporter B family member 4 |
| c39965_c0 | 7.91 | ABC transporter G family member 17 |
| c83650_c0 | 7.18 | ABC transporter G family member 43 |
| c70109_c0 | 6.61 | Zinc transporter 7 |
| c54092_c1 | 6.42 | Zinc transporter ZTP29 |
| c10112_c0 | 6.20 | ABC transporter F family member 4 |
| c77338_c0 | 6.15 | ABC transporter C family member 2 |
| c59065_c0 | 5.97 | Zinc transporter ZTP29 |
| c65853_c2 | 5.84 | ABC transporter F family member 1 |
| c80839_c1 | 5.82 | ABC transporter B family member 21 |
| c32003_c0 | 5.77 | ABC transporter F family member 4 |
| c82788_c0 | 5.36 | ABC transporter B family member 11 |
| c37195_c0 | 5.16 | Metal transporter Nramp3 |
| c87790_c0 | 5.09 | Metal transporter Nramp2 |
| c35172_c0 | 5.04 | ABC transporter G family member 22 |
| c37809_c0 | 5.01 | ABC transporter A family member 1 |
| c56776_c0 | 4.72 | Cadmium/zinc-transporting ATPase HMA2 |
| c90431_c0 | 4.69 | Zinc transporter 3 |
| c66824_c0 | 4.69 | Zinc transporter 1 |
| c77338_c1 | 4.26 | ABC transporter C family member 14 |
| c59283_c0 | 3.60 | Zinc transporter 5 |
| c60866_c0 | 3.30 | ABC transporter G family member 14 |
| c76227_c0 | 3.16 | ABC transporter A family member 2 |
| c81234_c0 | 3.13 | Zinc transporter 4 |
| c73636_c0 | 2.89 | Zinc transporter 4 |
| c78055_c0 | 2.74 | ABC transporter G family member 1 |
| c60915_c0 | 2.59 | ABC transporter B family member 11 |
| c60185_c0 | 2.59 | ABC transporter F family member 4 |
| c68969_c0 | 2.52 | Metal-nicotianamine transporter YSL3 |
| c62568_c0 | 2.51 | ABC transporter G family member 14 |
| c82493_c0 | 2.29 | ABC transporter G family member 16 |
| c81263_c0 | 2.19 | ABC transporter G family member 22 |
| c23361_c0 | −2.43 | ABC transporter F family member 4 |
| c74639_c0 | −2.50 | ABC transporter F family member 4 |
| c68390_c0 | −2.55 | Cadmium/zinc-transporting ATPase HMA3 |
| c28965_c0 | −2.67 | Metal-nicotianamine transporter YSL7 |
| c66361_c0 | −2.76 | Metal-nicotianamine transporter YSL14 |
| c57525_c0 | −2.79 | ABC transporter F family member 1 |
| c27812_c0 | −3.28 | ABC transporter F family member 4 |
| c67525_c0 | −3.75 | ABC transporter F family member 3 |
| c97488_c0 | −4.38 | ABC transporter B family member 4 |
| c3952_c0 | −4.63 | ABC transporter B family member 1 |
| c98738_c0 | −4.78 | ABC transporter C family member 2 |
| c85857_c0 | −5.30 | Zinc transporter 8 |
| c53195_c0 | −5.34 | Plant cadmium resistance protein 2 PCR2 |
| c27275_c0 | −5.68 | Zinc transporter 5 |
| c89759_c0 | −6.01 | ABC transporter G family member 40 |
| Sulfate, GSH metabolism | ||
| c85588_c0 | −6.46 | glutathione S-transferase |
| c57929_c0 | −6.28 | Monodehydroascorbate reductase |
| c85420_c0 | −6.23 | Glutathione S-transferase F9 |
| c85507_c0 | −6.18 | Glutathione S-transferase U8 |
| c66368_c0 | −6.09 | L-ascorbate peroxidase 1 |
| c85932_c0 | −6.07 | Glutathione S-transferase F6 |
| c88021_c0 | −5.71 | glutathione S-transferase |
| c92596_c0 | −5.71 | Cysteine synthase |
| c87506_c0 | −5.71 | Glutathione S-transferase U17 |
| c32193_c0 | −5.39 | glutathione S-transferase parC |
| c77199_c0 | −5.06 | L-ascorbate peroxidase 2 |
| c94817_c0 | −4.84 | Glutathione S-transferase U17 |
| c69512_c0 | −2.84 | Ornithine decarboxylase |
| c73219_c0 | −2.53 | Ornithine decarboxylase |
| c66300_c0 | −2.43 | Ornithine decarboxylase |
| c67901_c1 | 2.37 | γ-glutamyl-transpeptidase 3 |
| c80321_c1 | 2.64 | γ-glutamyl-transpeptidase 3 |
| c60771_c0 | 2.68 | Adenylyl-sulfate kinase 3 |
| c54934_c0 | 3.59 | Sulfate adenylyl-transferase |
| c56904_c0 | 4.02 | Monodehydroascorbate reductase |
| c40445_c0 | 4.69 | Spermidine synthase 1 |
| c88608_c0 | 4.79 | L-ascorbate peroxidase 7 |
| c67547_c0 | 4.86 | adenylyl-sulfate reductase 3 |
| c65681_c0 | 4.97 | Cysteine synthase |
| c31632_c0 | 5.15 | Serine acetyltransferase 5 |
| c51737_c1 | 5.88 | Glutathione S-transferase L2 |
| c69922_c0 | 5.99 | Glutathione S-transferase F9 |
| c52639_c0 | 6.36 | Glutathione S-transferase F13 |
| c27387_c0 | 6.85 | Sulfite reductase |
| Metallothioneins(MTs) | ||
| c83366_c0 | −9.45 | Metallothionein-like protein type 2 |
| c83540_c0 | −8.79 | Metallothionein-like protein type 3 |
| c39380_c0 | −8.50 | Metallothionein-like protein type 3 |
| c84110_c0 | −7.91 | Metallothionein-like protein type 2 |
| c10641_c0 | −7.39 | Metallothionein-like protein 1 |
| c85025_c0 | −5.39 | Metallothionein-like protein type 2 |
| c25697_c0 | 5.27 | Metallothionein-like protein type 2 |
| Phenylpropanoid metabolism | ||
| c84209_c0 | −7.69 | Peroxidase 42 |
| c62400_c0 | −7.33 | Peroxidase 4 |
| c52362_c0 | −6.53 | Caffeic acid 3-O-methyltransferase COMT |
| c88098_c0 | −6.44 | Trans-cinnamate 4-monooxygenase |
| c84029_c0 | −6.41 | Peroxidase 42 |
| c87932_c0 | −6.09 | Peroxidase 15 |
| c86814_c0 | −5.39 | Phenylalanine ammonia-lyase PAL |
| c90791_c0 | −5.14 | Cinnamyl alcohol dehydrogenase 1 CAD1 |
| c90727_c0 | −4.84 | Trans-cinnamate 4-monooxygenase |
| c86953_c0 | −4.71 | Caffeic acid 3-O-methyltransferase COMT |
| c98254_c0 | −4.47 | Caffeic acid 3-O-methyltransferase COMT |
| c79992_c0 | 2.10 | 4-coumarate–CoA ligase-like 4CL |
| Cell wall metabolism | ||
| c52549_c0 | 6.75 | Beta-fructofuranosidase |
| c55905_c0 | −5.85 | Fructokinase-4 |
| c22672_c0 | 4.75 | Glucose-6-phosphate isomerase GPI |
| c63434_c0 | 3.15 | Pectinesterase 2 |
| c88310_c0 | −6.09 | Pectinesterase 3 |
| c92007_c0 | −5.03 | Pectinesterase U1 |
| c63222_c0 | −7.80 | Sucrose synthase 1 |
| c25867_c0 | −5.98 | Sucrose synthase 2 |
| c88935_c0 | −5.25 | Sucrose synthase 2 |
| c87544_c0 | −5.56 | Sucrose synthase 3 |
| c86190_c0 | −4.97 | Sucrose synthase 3 |
| c53972_c0 | −6.18 | UDP-glucose 6-dehydrogenase 1 UGDH1 |
| c43360_c0 | 6.03 | UDP-glucose pyrophosphorylase UGP2 |
| c86968_c0 | −5.92 | UDP-glucuronate 4-epimerase 1 |
| c36225_c0 | −6.37 | UDP-glucuronate 4-epimerase 4 |
| c32187_c0 | −5.60 | UDP-glucuronate 4-epimerase 6 |
| c86761_c0 | −5.64 | UDP-glucuronate 4-epimerase 6 |
| c84524_c0 | 2.21 | Xyloglucan endotransglucosylase/hydrolase protein 23 |
| c84832_c0 | 2.87 | Xyloglucan endotransglucosylase/hydrolase protein 32 |
| c87800_c0 | −5.09 | Xyloglucan endotransglucosylase/hydrolase protein 6 |
| c87242_c0 | −5.09 | Xyloglucan endotransglucosylase/hydrolase protein B |
| c64115_c0 | 2.67 | Xyloglucan endotransglucosylase/hydrolase protein 32 |
| c27718_c0 | −5.75 | Xyloglucan endotransglucosylase/hydrolase protein 9 (Precursor) |
| c75386_c0 | 5.02 | Callose synthase 7 |
| c80747_c0 | 2.55 | Cellulose synthase-like protein G3 |
| c49538_c0 | 2.97 | Expansin-A1 |
| c50143_c0 | 2.46 | Expansin-A10 |
| c63814_c0 | 5.05 | Glucan 1,3-alpha-glucosidase |
| c66127_c0 | 3.21 | Laccase-12 |
| TCA cycle | ||
| c87855_c0 | −6.01 | Aconitate hydratase ACO |
| c88735_c0 | 5.48 | ATP-citrate synthase alpha chain protein 1 ACLA |
| c89044_c0 | −6.62 | Dihydrolipoyl dehydrogenase 1 LPD1 |
| c91756_c0 | 3.72 | Dihydrolipoyl dehydrogenase 1 LPD1 |
| c33952_c0 | 6.55 | Dihydrolipoyl dehydrogenase LPD |
| c71205_c0 | 2.53 | Dihydrolipoyllysine-residue acetyltransferase DLAT |
| c87987_c0 | 3.98 | Isocitrate dehydrogenase IDH3 |
| c56559_c0 | −5.92 | Malate dehydrogenase MDH |
| c59906_c0 | −5.52 | Malate dehydrogenase MDH |
| c99710_c0 | −4.84 | Malate dehydrogenase MDH |
| c61978_c0 | −4.71 | Malate dehydrogenase MDH |
| c91986_c0 | −5.09 | Succinate dehydrogenase |
| c23134_c0 | −5.82 | Malate dehydrogenase1 MDH1 |
| c52564_c0 | 3.59 | Pyruvate dehydrogenase PDHA |
| c85739_c0 | 4.49 | Pyruvate dehydrogenase PDHA |
| c87218_c0 | 4.93 | Pyruvate dehydrogenase PDHA |
| c57876_c0 | 5.79 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1 SDHB |
| nitrogen metabolism | ||
| c86348_c0 | −6.61 | Glutamate synthase [NADH] |
| c85579_c0 | −6.18 | Glutamine synthetase |
| c86171_c0 | −5.26 | Glutamine synthetase |
| c39565_c0 | −5.17 | Glutamine synthetase |
| c88704_c0 | −5.09 | Nitrate reductase [NADH] |
| c91005_c0 | −4.97 | Glutamate synthase 1 [NADH] |
| c24081_c0 | −4.47 | Glutamine synthetase |
| c72948_c0 | 3.64 | Ferredoxin–nitrite reductase |
| c66268_c0 | 5.30 | High-affinity nitrate transporter 2.2 |
| c53175_c0 | 5.54 | Glutamine synthetase |
| c87775_c0 | 5.70 | Nitrate reductase [NADH] |
| antioxidant system | ||
| c85366.c0 | −7.03 | Superoxide dismutase [Cu-Zn] |
| c88413.c0 | −4.55 | Superoxide dismutase [Cu-Zn] |
| c58063.c0 | −5.60 | Superoxide dismutase [Mn] |
| c86851.c0 | −4.93 | Catalase isozyme 1 |
| c85554.c0 | −6.15 | Catalase isozyme 2 |
| c88142.c0 | −4.63 | Catalase isozyme 2 |
| c86608.c0 | −4.38 | Catalase-2 |
| c31799_c0 | 5.07 | Phospholipid hydroperoxide glutathione peroxidase 1 |
| c33214_c0 | 4.83 | Probable phospholipid hydroperoxide glutathione peroxidase 6 |
| c56904_c0 | 4.02 | Monodehydroascorbate reductase |
| c57929_c0 | −6.28 | Monodehydroascorbate reductase |
| c66368_c0 | −6.09 | L-ascorbate peroxidase 1 |
| c77199_c0 | −5.06 | L-ascorbate peroxidase 2 |
| c88608_c0 | 4.79 | L-ascorbate peroxidase 7 |