53BP1	p53-binding protein 1
ALP	autophagy-lysosome pathway
AMPK	adenosine monophosphate-activated protein kinase
AP	apurinic/apyrimidinic sites
ATF	activating transcription factor
ATM	ataxia telangiectasia mutated
ATR	ataxia telangiectasia mutated and Rad3 related
ATRIP	ataxia telangiectasia mutated and Rad3 related interacting protein
BER	base-excision repair
BRCA1	breast cancer type 1 susceptibility protein
CDK	cyclin-dependent kinase
CHEK1	checkpoint kinase-1
CHEK2	checkpoint kinase-2
DDR	DNA damage response
DNA-PKcs	DNA-dependent protein kinase catalytic subunit
DSB	double strand break
ER	endoplasmic reticulum
ERAD	endoplasmic reticulum-associated degradation
FA	Fanconi anemia complex
FIP200	200-kDa FAK-family-interacting protein
FLNA	filamin A
FoxO	forkhead box O
GPX1	glutathione peroxidase 1
GSTD1	glutathione S-transferase 1
HDACs	histone deacetylases
HR	homologous recombination
HIF-1	hypoxia-inducible factor 1
Hsf1	heat shock factor 1
Hsp	heat shock protein
IRE1	inositol-requiring enzyme 1
IR	ionizing radiation
Keap1	kelch-like ECH-associated protein 1
KLHL15	kelch-like protein 15
LAD	lamin-associated domain
maf	v-Maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MDC1	mediator of DNA damage checkpoint 1
MDM2	mouse double minute 2 homolog
MMR	mismatch repair
MRN	MRE11/RAD50/NBS1 complex
NQO1	NA(D)PH quonine dehydrogenase 1
NER	nucleotide excision repair
NHEJ	non-homologous end joining
Nrf2	nuclear factor erythroid 2-related factor 2
PERK	protein kinase R-like endoplasmic reticulum kinase
PIAS	protein inhibitor of activated STAT
PICHROS	protein-induced chromatin stress
PIKK	phosphatidylinositol 3-kinase-related kinase
PKR	protein kinase R
PN	proteostasis network
PTM	post-translational modification
RB1CC1	RB1-inducible coiled-coil 1
RNF168	ring finger protein 168
ROS	reactive oxygen species
SIRT1	sirtuin 1
sHSP	small heat-shock protein
SOD	superoxide dismutase
SSB	single strand brake
TIGAR	TP53-inducible glycolysis and apoptosis regulator
TOR	target of rapamycin
UBD	ubiquitin binding domain
UBL	ubiquitin-like protein
ULK-1	unc-51 like autophagy activating kinase 1
UPP	ubiquitin-proteasome pathway
UPR	unfolded protein response
UPRER	endoplasmic reticulum unfolded protein response
UV	ultra violet
VCP	valosin-containing protein
XBP1	X box-binding protein