Table 1.
Summary of current publications on heat-responsive proteomics.
| Plant Species | Tissue/Organ | Variety | Treatment Conditions | Platforms | Protein Species (a) | Unique Proteins (b) | Reference |
|---|---|---|---|---|---|---|---|
| Agave americana | leaf chloroplast | nd | 55 °C; 4 h | 2DE, ESI-Q-Trap MS | 58 | 58(26/32) | [19] |
| Agrostis scabra/Agrostis stolonifera | root | nd; Penncross | 20 °C, 30 °C, 40 °C; 2 d, 10 d | 2DE, MALDI-TOF/TOF MS | 70 | 67(23/44) | [20] |
| Agrostis scabra/Agrostis stolonifera | leaf | nd; Penncross | 40 °C/35 °C day/night; 2 d, 10 d | 2DE-DIGE | 71 | 71(57/14) | [21] |
| Arabidopsis thaliana | leaf | Columbia (Col-0) | 40 °C; 6 h | 2DE, MALDI-TOF MS, ESI-Q-Trap MS | 37 | 33(12/21) | [22] |
| Avena sativa | seed | nd | 35 °C, 45 °C, 50 °C; 24 h, 2 d | 2DE, ESI-Orbitrap MS | 21 | 21(2/19) | [23] |
| Brassica oleracea | leaf | TSS-AVRDC-2; B-75 | 40 °C; 3 d | 2DE, MALDI-TOF MS | 24 | 24(10/13/1) | [24] |
| Carissa spinarum | leaf | nd | 42 °C/35 °C day/night; 48 h, 120 h | 2DE, MALDI-TOF/TOF MS | 49 | 26(13/13) | [25] |
| Glycine max | leaf, stem, root | Enrei | 40 °C; 6, 12, 24 h | 2DE, MALDI-TOF MSESI-Orbitrap MS | 150 | 150(122/28) | [26] |
| Glycine max | leaf | Surge; Davison | 40 °C/35 °C day/night; 6 d | 2DE-DIGE, MALDI-TOF MS | 88 | 44(19/25) | [27] |
| Glycine max | seed | Ningzhen No. 1 | 40 °C/30 °C day/night; 24, 96, 168 h | 2DE, MALDI-TOF MS | 42 | 42(22/20) | [28] |
| Hordeum spontaneum | leaf | nd | 42 °C, 2 h | 2DE-DIGE, MALDI-TOF/TOF MS | 20 | 20(12/8) | [29] |
| Hordeum vulgare | leaf | Arta; Keel | 36 °C/32 °C day/night; 7 d | 2DE, MALDI-TOF/TOF MS | 99 | 99(67/32) | [30] |
| Medicago sativa | leaf | Huaiyin | 36 °C; 24, 48, 72 h | 2DE, MALDI-TOF/TOF MS | 81 | 81 | [31] |
| Miscanthus sinensis | leaf | Kosung | 42 °C; 24, 48 h | 2DE, MALDI-TOF MS, 2DE, MALDI-TOF/TOF MS | 55 | 55(30/25) | [32] |
| Oryza meridionalis | leaf | nd | 45 °C; 24 h | 2DE, ESI-Q-Trap MS | 50 | 38(22/16) | [33] |
| Oryza sativa | leaf | Dongjin | 40 °C; 12, 24 h | 2DE, MALDI-TOF MS | 73 | 56(47/9) | [34] |
| Oryza sativa | leaf | nd | 35, 40, 45 °C; 48 h | 2DE, MALDI-TOF MS | 63 | 52(28/24) | [35] |
| Oryza sativa | leaf | N22 | 42 °C/32 °C day/night; 24 h | 2DE, MALDI-TOF MS | 111 | 52(37/15) | [36] |
| Oryza sativa | leaf, spikelet | N22; Gharib | 28 °C; 12 h | 2DE, MALDI-TOF MS | 36 | 36 | [37] |
| Oryza sativa | cell suspension cultures | Doongara | 44 °C; 3 d | 1DE, ESI-Q-Trap MS | 139 | 139 | [38] |
| Oryza sativa | grain | Khao Dawk Mali 105 | 40 °C; 3 d | ESI-Orbitap MS | 822 | 822 | [39] |
| Oryza sativa | leaf | Nipponbare | 42 °C, 12 h, 24 h | 2DE, MALDI-TOF/TOF MS | 12 | 12(9/3) | [40] * |
| Pinellia ternata | leaf | nd | 38 °C; 24 h | 2DE, MALDI-TOF/TOF MS | 27 | 24(17/7) | [41] |
| Portulaca oleracea | leaf | nd | 35 °C; 6h, 12 h, 24 h | 2D, MALDI-TOF/TOF MS | 154 | 51(36/15) | [42] |
| Prunus persica | mesocarp | nd | 39 °C; 3 d | 2DE, MALDI-TOF/TOF MS | 44 | 33(15/18) | [43] |
| Raphanus sativus | leaf | NAU-08Hr-10 | 40 °C; 0 h, 12 h, 24 h | 2DE, MALDI-TOF/TOF MS | 11 | 11(4/1/6) | [44] |
| Triticum aestivum | endosperm | Récital | 34 °C/10 °C day/night | 2DE, MALDI-TOF MS | 37 | 23(22/1) | [45] |
| Triticum aestivum | non-prolamins | Thésée | 34 °C/10 °C day/night | 2DE, MALDI-TOF MS | 42 | 24(16/8) | [46] |
| Triticum aestivum | seed | Svevo | 37 °C/17 °C day/night; 5 d | 2DE, MALDI-TOF/TOF MS | 47 | 47(37/10) | [47] |
| Triticum aestivum | spikelet | Vinjett | 32 °C/24 °C day/night; 10 d | 2DE, MALDI-TOF/TOF MS | 57 | 57(36/21) | [48] |
| Triticum aestivum | leaf | 810; 1039 | 35 °C/26 °C day/night; 5 d | 2DE, MALDI-TOF MS | 49 | 49(32/11, 12/21) | [49] |
| Vitis vinifera | leaf | Cabernet Sauvignon | 43 °C; 6 h | iTRAQ, ESI-Q-TOF MS | 113 | 113(48/65) | [50] |
| Zea mays | leaf | Zhengdan 958 | heat from 28 to 42 °C, total 8 h | iTRAQ, ESI-Orbitrap MS | 172 | 172(77/95) | [51] * |
(a) The number of identified protein identities included all the protein isoforms generated from gene variable splicing and post-translational modifications in these original publications. (b) The number of non-redundant protein identities whose members have similar protein sequence homology and functional domain (increased protein number/decreased protein number). The references labeled with * are phosphoproteomic studies. The information of these heat-responsive proteins is listed in Tables S1 and S2. 2DE, two-dimensional electrophoretic; d, days; DIGE, two-dimensional fluorescence difference in gel; ESI-Q-TOF MS, electrospray ionization quadrupole time-of-flight mass; iTRAQ, isobaric tags for relative and absolute quantitation; MALDI-TOF MS, matrix-assisted laser desorption/ionization time-of-flight mass; MALDI-TOF/TOF MS, matrix-assisted laser desorption/ionization tandem time-of-flight mass; nd, not detected.