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. Author manuscript; available in PMC: 2018 Sep 1.
Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2016 Jan 26;14(5):1070–1081. doi: 10.1109/TCBB.2016.2520919

Fig. 4. Examination of the impact of distinct approaches to identify regions of interest.

Fig. 4

MA-plots were generated by DESeq for each of three distinct methods of determining differential transcription using FStitch active calls. The projection method has two variations, one starts with (A) the DMSO active calls and the other with (B) Nutlin active calls. The other methods are (C) joint and (D) the merge method. See text for details on each method.