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. 2015 Sep 2;4:126–133. doi: 10.1016/j.bbrep.2015.08.023

Table 2A.

Folding of chignolin in 20 NTP MD simulations at 300 K using FF12MC.

Time step (fssmt) Aggregated simulation time (μssmt) Aggregated native state population (%)
Estimated folding time (nssmt)
Mean SD SE Mean LCL UCL Event
1.00 0.632 3 7 2 4
1.00 1.264 7 17 4 7
1.00 1.896 14 22 5 87 53 145 15
1.00 2.528 18 25 5 92 56 150 16
1.00 3.160 22 26 6 82 53 129 19
1.00 3.792 26 26 6 79 51 123 20
1.00 4.424 30 26 6 79 51 123 20
1.00 5.056 31 25 6 79 51 123 20
1.00 5.688 33 24 5 79 51 123 20
1.00 6.320 33 23 5 79 51 123 20
1.00 6.952 34 22 5 79 51 123 20
1.00 7.584 35 21 5 79 51 123 20
1.00 8.216 35 21 5 79 51 123 20
1.00 8.848 35 20 5 79 51 123 20
1.00 9.480 36 20 4 79 51 123 20
1.00 12.640 36 14 3 79 51 123 20
1.00 15.800 38 13 3 79 51 123 20
1.00 18.960 36 12 3 79 51 123 20
1.00 22.120 35 13 3 79 51 123 20
1.00 25.280 35 12 3 79 51 123 20
1.00 28.440 35 12 3 79 51 123 20
1.00 31.600 35 12 3 79 51 123 20

Aggregated native state population: number of conformations from 20 simulations with CαβRMSDs of ≤1.96 Å divided by number of all conformations from the 20 simulations. All MD simulations were performed for 500 million time steps with conditions described in Methods and Table S1. SD: Standard deviation. SE: Standard error. LCL: Lower 95% confidence limit. UCL: Upper 95% confidence limit. Event: number of simulations that captured a folding event.