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. 2017 Oct 31;7:459. doi: 10.3389/fcimb.2017.00459

Table 1.

General properties of all 19 Piscirickettsia salmonis with complete genome sequences available.

Strain # of contigs # of proteins (This work) # of proteins (NCBI) Length (Mb) GC content (%) Accession number Host References
AY3800B 1 2,496 2,909 3.19 39.7 CP013816.1 S. salar
AY3864B 1 2,493 2,908 3.19 39.7 CP013811.1 S. salar
AY6297B 1 2,498 2,908 3.19 39.7 CP013791.1 S. salar
AY6492A 1 2,489 2,889 3.04 39.7 CP013757.1 S. salar
AY6532B 1 2,538 2,895 3.19 39.7 CP013796.1 S. salar
LF-89 (ATCC VR-1361) 1 2,518 2,863 3.18 39.7 CP011849.2 O. kisutch Pulgar et al., 2015
PM15972A1 1 2,479 2,909 3.06 39.8 CP012413.1 S. salar Bohle et al., 2014
PM21567A 1 2,497 2,885 3.04 39.7 CP013762.1 S. salar
PM22180B 1 2,486 2,894 3.19 39.7 CP013801.1 O. mykiss
PM23019A 1 2,576 2,874 3.05 39.7 CP013768.1 S. salar
PM25344B 1 2,717 2,738 3.19 39.7 CP013821.1 O. mykiss
PM31429B 1 2,501 2,913 3.19 39.7 CP013806.1 O. mykiss
PM32597B1 1 2,488 2,897 3.19 39.7 CP012508.1 O. kisutch Bohle et al., 2014
PM37984A 1 2,488 2,911 3.05 39.7 CP013773.1 S. salar
PM49811B 1 2,532 2,882 3.19 39.7 CP013781.1 S. salar
PM51819A 1 2,578 3,004 3.14 39.7 CP013778.1 S. salar
PM58386B 1 2,504 2,910 3.19 39.7 CP013786.1 S. salar
PSCGR01 1 2,510 2,866 3.17 39.7 CP013944.1 O. kisutch
PSCGR02 1 2,533 2,910 3.21 39.7 CP013975.1 S. salar

All information was obtained from the NCBI database (NCBI Resource Coordinators, 2016). The Proteins numbers for each sequence was obtained by open reading frame predictions using Glimmer v3.02 (Delcher et al., 1999).