Table 2. DE miRNAs enriched in P53 signaling pathway.
Categories | miRNA name | Heart | Lung | Target genes in Tarbase |
---|---|---|---|---|
DE in two tissues | miR-192-5p | down | down | CDKN2,MDM2, EI24, PERP, ZMAT3 |
miR-32-3p | down | down | MDM4, CDK4, ZMAT3, CCNG1, PPM1D, CASP3 | |
miR-200b-3p | down | up | MDM4, CCNE1, CDK2, PMAIP1, ZMAT3, SIAH1, DDB2, RCHY1 | |
miR-146b-5p | up | up | ATR, CDKN1A, THBS1, CCNB3 | |
miR-122-5p | down | down | MDM4, ATM, TP53, CCNE1, GTSE1, CD262, BCL2L4, CCNG1, TP73, CYCS | |
DE in heart | miR-200a-3p | down | no | CDKN1A, CCNE1, SIAH1, THBS1, RRM2B |
miR-708-5p | down | no | SESN3, CCNB3 | |
miR-429 | down | no | CDK2, PMAIP1, SIAH1 | |
miR-885-5p | down | no | CDK2 | |
miR-194-5p | down | no | TSC2 | |
miR-708-3p | down | no | CASP3 | |
miR-208a-3p | down | no | CHK1 | |
miR-181a-2-3p | down | no | MDM2, CDK4, GTSE1, BCL2L4, SERPINE1 | |
miR-218-5p | down | no | ATR, ATM, TP53, CDKN1A, CDK4, BCL2L4, ZMAT3, IGFBP3, SERPINE1, SESN3, CCND3, CD262, RCHY1 | |
DE in lung | miR-424-5p | no | up | IGFBP3, RRM2B, SESN3, IGFBP3, CCNG1, SIAH1, MDM2, CHK1, CDKN1A |
CDK4, GTSE1, RFWD2, CD262, PERP, ZMAT3, PPM1D, SCOTIN | ||||
miR-582-5p | no | up | ATR, CDK4, CCND3, PERP, SIAH1, PTEN, CCNG1, SIAH1, CYCS, CCNB3 | |
miR-34b-5p | no | up | CDKN1A, CDK4, CD262, SIAH1, PPM1D, THBS1 | |
miR-450b-5p | no | up | MDM2, CDK4, THBS1, SESN3 | |
miR-34c-5p | no | up | CDK4, STEAP3, SERPINE1 | |
miR-136-5p | no | up | THBS1 | |
miR-582-3p | no | up | CDK4, PTEN, CCNB3 | |
miR-19b-3p | no | up | MDM2,MDM4,ATM,CHK1,TP53,CDKN1A | |
miR-379-5p | no | down | SERPINE1, CASP3 | |
miR-382-5p | no | down | PTEN, TSC2, CASP3 | |
miR-181c-3p | no | down | MDM2, EI24 | |
miR-299-5p | no | down | CDKN1A, SERPINE1 | |
miR-449b-5p | no | down | CDK4, SERPINE1, THBS1, STEAP3 | |
miR-551b-3p | no | down | ZMAT3 | |
miR-127-3p | no | down | THBS1 | |
miR-127-5p | no | down | THBS2 | |
miR-122-3p | no | down | CD262 |
Notes.
“Down” indicated downregulated in yak; “up” indicated upregulated in yak, “no” indicated not differently expressed in particular tissue.