Skip to main content
. 2017 Nov 2;5:e3959. doi: 10.7717/peerj.3959

Table 2. DE miRNAs enriched in P53 signaling pathway.

Categories miRNA name Heart Lung Target genes in Tarbase
DE in two tissues miR-192-5p down down CDKN2,MDM2, EI24, PERP, ZMAT3
miR-32-3p down down MDM4, CDK4, ZMAT3, CCNG1, PPM1D, CASP3
miR-200b-3p down up MDM4, CCNE1, CDK2, PMAIP1, ZMAT3, SIAH1, DDB2, RCHY1
miR-146b-5p up up ATR, CDKN1A, THBS1, CCNB3
miR-122-5p down down MDM4, ATM, TP53, CCNE1, GTSE1, CD262, BCL2L4, CCNG1, TP73, CYCS
DE in heart miR-200a-3p down no CDKN1A, CCNE1, SIAH1, THBS1, RRM2B
miR-708-5p down no SESN3, CCNB3
miR-429 down no CDK2, PMAIP1, SIAH1
miR-885-5p down no CDK2
miR-194-5p down no TSC2
miR-708-3p down no CASP3
miR-208a-3p down no CHK1
miR-181a-2-3p down no MDM2, CDK4, GTSE1, BCL2L4, SERPINE1
miR-218-5p down no ATR, ATM, TP53, CDKN1A, CDK4, BCL2L4, ZMAT3, IGFBP3, SERPINE1, SESN3, CCND3, CD262, RCHY1
DE in lung miR-424-5p no up IGFBP3, RRM2B, SESN3, IGFBP3, CCNG1, SIAH1, MDM2, CHK1, CDKN1A
CDK4, GTSE1, RFWD2, CD262, PERP, ZMAT3, PPM1D, SCOTIN
miR-582-5p no up ATR, CDK4, CCND3, PERP, SIAH1, PTEN, CCNG1, SIAH1, CYCS, CCNB3
miR-34b-5p no up CDKN1A, CDK4, CD262, SIAH1, PPM1D, THBS1
miR-450b-5p no up MDM2, CDK4, THBS1, SESN3
miR-34c-5p no up CDK4, STEAP3, SERPINE1
miR-136-5p no up THBS1
miR-582-3p no up CDK4, PTEN, CCNB3
miR-19b-3p no up MDM2,MDM4,ATM,CHK1,TP53,CDKN1A
miR-379-5p no down SERPINE1, CASP3
miR-382-5p no down PTEN, TSC2, CASP3
miR-181c-3p no down MDM2, EI24
miR-299-5p no down CDKN1A, SERPINE1
miR-449b-5p no down CDK4, SERPINE1, THBS1, STEAP3
miR-551b-3p no down ZMAT3
miR-127-3p no down THBS1
miR-127-5p no down THBS2
miR-122-3p no down CD262

Notes.

“Down” indicated downregulated in yak; “up” indicated upregulated in yak, “no” indicated not differently expressed in particular tissue.