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. 2017 Nov 1;8:1875. doi: 10.3389/fpls.2017.01875

Table 3.

Genes recovered within the “Adenocalymma-Neojobertia” clade.

Gene function	Gene type	Gene
Self-replication	• rRNA genes • tRNA genes • Small ribosomal subunit • Large ribosomal subunit • DNA dependent RNA	rrn4.5^a, rrn5^a, rrn16^a, rrn23^a trnA-UGC^a ^, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-UCC, trnG-UCC^, trnH-GUG, trnI-CAU^a, trnI-GAU^a ^, trnK-UUU^, trnL-CAA^a, trnL-UAA^, trnL-UAG, trnM-CAU, trnN-GUU^a, trnP-UGG, trnQ-UUG, trnR-ACG^a trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC^a, trnV-UAC^, trnW-CCA, trnY-GUA rps2, rps3, rps4, rps7^a, rps8, rps11, rps12^a ^*, rps14, rps15 ^a, rps16 ^, rps18, rps19 ^b rpl2^a ^, rpl14, rpl16^, rpl20, rpl22, rpl23^a, rpl32, rpl33, rpl36 rpoA, rpoB, rpoC1^, rpoC2*
Photosynthesis	• Photosystem I • Photosystem I • NADH-dehydrogenase • Cytochrome b6/f • complex • ATP synthase • Rubisco	psaA, psaB, psaC, psaI, psaJ, ycf3^** psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ ndhA^, ndhB^a ^, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK petA, petB^, petD^, petG, petL, petN atpA, atpB, atpE, atpF^, atpH, atpI* rbcL
Other genes	• Translational initiator • Maturase • Protease • Envelope membrane • protein • Acetil-CoA-carboxylase • c-type cytochrome • synthesis	infA matK clpP^** cemA accD ccsA
Unknown function	Conserved open read frames	ycf1^a, ycf2^a, ycf4^b

^*

Gene with one intron.

^**

Gene with two introns.

^a

Gene with two copies.

^b

Pseudogene in some species.