Table 1.
Yeast species occurrence and distribution of the isolated and identified from V. vinifera ssp sylvestris and from the different vine cultivars of V. vinifera ssp vinifera (conventional, biodynamic, and organic), GenBank accession numbers of the deposited sequences and The Centraalbureau voor Schimmelcultures (CBS) and D1/D1 Genbank accession numbers of the most similar types.
| Isolate | Most similar type/reference strain | Source | ||||||
|---|---|---|---|---|---|---|---|---|
| Strain code | D1/D2 accession no. | ITS accession no. | Taxonomic name | D1/D2 accession number | Conventional vineyard | Biodynamic Vineyard | Organic Vineyard | Vitis vinifera ssp. sylvestris |
| FZ02 | MF926292 | MF783894 | Aureobasidium pullulans CBS584.75 | KT361587.1 | 46 | 15 | 9 | 1 |
| CABMC2A | MF927682 | MF770161 | Candida californica CBS989 | KY816896 | – | – | – | 1 |
| FZ03a | MF783064 | – | Filobasidium stepposum CBS10265 | KY107724.1 | 2 | – | – | – |
| HB09c | MF783066 | – | Filobasidium wieringae CBS1937 | KY107733 | – | – | – | 1 |
| CABMB1A | MF783060 | – | Hanseniaspora clermontiae CBS8821 | EU272040 | – | – | – | 1 |
| HURM6B | MF926297.1 | – | Hanseniaspora ssp CBS276 | KY107853 | – | – | – | 4 |
| CAMB9A | MF783054 | – | Hanseniaspora uvarum CBS9790 | KJ794689 | 17 | 34 | 1 | 28 |
| NUR3AM | MF926296 | – | Hyphopichia pseudoburtoni CBS2455 | KU609072 | – | – | – | 1 |
| ROMA10* | MF783057 | – | Metschnikowia fructicola CBS8853 | AF360542 | – | – | – | 5 |
| CABM7C* | MF783068 | – | Metschnikowia pulcherrima CBS5833 | JN083816 | 9 | 8 | 1 | 1 |
| CABM9C* | MF783069 | – | Metschnikowia spp CBS5536 | KM350710 | – | – | – | 5 |
| ROMAM1A* | MF783062 | – | Metschnikowia viticola CBS9950 | KC859919 | – | – | – | 2 |
| SEHMA2 | MF783056 | – | Meyerozyma caribbica CBS2829 | KX507035 | – | – | – | 1 |
| SEHIB8 | MF783055 | – | Meyerozyma guilliermondii CBS8105 | KY108543 | – | – | – | 4 |
| HB01a | MF926291 | MF783893 | Papiliotrema flavescens CBS942 | AB035042 | 4 | – | 1 | – |
| CABM8C | MF926294 | MF783895 | Pichia fermentans CBS5663 | EF550234 | – | – | – | 1 |
| SEMA6B | MF783059 | – | Pichia kluyveri CBS7274 | KY108823 | – | – | – | 4 |
| SEHM2A | MF927685 | MF783892 | Rhodosporidium babjevae CBS322 | AF387771 | – | – | – | 1 |
| EP02c | MF783058 | MF927679 | Rhodotorula glutinis CBS2889 | KY109044 | 3 | 4 | 1 | – |
| HURM4A | MF783067 | MF927680 | Rhodotorula mucilaginosa CBS482 | KY109140 | – | – | – | 1 |
| SEHUM7B | MF783065 | MF784281 | Rhodotorula nothofagi CBS9091 | AF444736 | – | – | – | 1 |
| ARIM1B | MF926295 | MF783896 | Rhodotorula paludigena CBS4477 | KY109146.1 | – | – | – | 1 |
| CABMA3A | MF783053 | – | Saccharomyces cerevisiae CBS2963 | KF214442 | – | – | – | 1 |
| SEHM1C | MF770267 | – | Scheffersomyces stipitis CBS7126 | KY109584.1 | – | – | – | 1 |
| PIEM5B | MF783061 | – | Schwanniomyces polymorphus CBS6456 | KY109627 | – | – | – | 1 |
| HB02b | MF926293 | MF783891 | Vishniacozyma carnescens CBS973 | AB035054 | 4 | 1 | 3 | – |
| Total: | 85 | 62 | 16 | 67 | ||||
*
This table shows the most probable yeast strain according to the compared databased belonging to the Metschnikowia clade, but these yeast strains cannot be assigned unequivocally to one of the species in the clade.