Table 3.
Number of genes in the genomes of Actinoalloteichus spp. DSM 46855T and DSM 46856 associated with the general COG functional categories
| Code | DSM 46855 | DSM 46856 | Description | ||
|---|---|---|---|---|---|
| Value | % age | Value | % age | ||
| J | 205 | 3.44 | 202 | 3.27 | Translation, ribosomal structure and biogenesis |
| A | 1 | 0.02 | 1 | 0.02 | RNA processing and modification |
| K | 466 | 7.83 | 471 | 7.62 | Transcription |
| L | 120 | 2.02 | 130 | 2.10 | Replication, recombination and repair |
| B | 1 | 0.02 | 1 | 0.02 | Chromatin structure and dynamics |
| D | 34 | 0.57 | 35 | 0.57 | Cell cycle control, cell division, chromosome partitioning |
| V | 174 | 2.92 | 172 | 2.78 | Defense mechanisms |
| T | 196 | 3.29 | 198 | 3.20 | Signal transduction mechanisms |
| M | 174 | 2.92 | 176 | 2.85 | Cell wall/membrane biogenesis |
| N | 5 | 0.08 | 7 | 0.11 | Cell motility |
| U | 30 | 0.50 | 31 | 0.50 | Intracellular trafficking and secretion, and vesicular transport |
| O | 141 | 2.37 | 140 | 2.27 | Posttranslational modification, protein turnover, chaperones |
| Z | 0 | 0.00 | 0 | 0.00 | Cytoskeleton |
| W | 5 | 0.08 | 7 | 0.11 | Extracellular structures |
| C | 211 | 3.55 | 214 | 3.46 | Energy production and conversion |
| G | 385 | 6.47 | 383 | 6.20 | Carbohydrate transport and metabolism |
| E | 334 | 5.61 | 335 | 5.42 | Amino acid transport and metabolism |
| F | 98 | 1.65 | 98 | 1.59 | Nucleotide transport and metabolism |
| H | 268 | 4.50 | 266 | 4.31 | Coenzyme transport and metabolism |
| I | 194 | 3.26 | 193 | 3.12 | Lipid transport and metabolism |
| P | 209 | 3.51 | 211 | 3.42 | Inorganic ion transport and metabolism |
| Q | 189 | 3.18 | 207 | 3.35 | Secondary metabolites biosynthesis, transport and catabolism |
| R | 485 | 8.15 | 484 | 7.83 | General function prediction only |
| S | 156 | 2.62 | 158 | 2.56 | Function unknown |
| X | 5 | 0.08 | 12 | 0.19 | Mobilome: prophages, transposons |
| – | 2564 | 43.08 | 2733 | 44.24 | Not in COGs |