Table 2. Model choice procedure of the ABC approaches used for comparing demographic scenarios of A. ostoyae in the Landes de Gascogne.
Scenario 1 | Scenario 2 | Scenario 3 | Scenario 4 | Scenario 5 | Scenario 6 | Scenario 7 | |
---|---|---|---|---|---|---|---|
ABC–RF | |||||||
Votes (s.d.) | 54.5 (± 5.6) | 102.8 (± 7.7) | 66.6 (± 8.0) | 40.4 (± 6.4) | 27.8 (± 3.9) | 198.5 (± 8.9) | 9.4 (± 2.8) |
Post. Prob. (s.d.) | – | – | – | – | – | 0.22 (± 0.05) | – |
Prior error rate (s.d.) | – | – | – | – | – | 73.8% (± 0.0%) | – |
ABC-LDA | |||||||
Post. Prob. (95% CI) | 0.15 (0.15–0.16) | 0.28 (0.27–0.28) | 0.07 (0.07–0.08) | 0.1 (0.09–0.10) | 0.11 (0.10–0.11) | 0.27 (0.26–0.27) | 0.03 (0.03–0.03) |
Performance | |||||||
D1 | 15.2% | 12.4%* | 8.9% | 6.9% | 12.2% | 10.3%§ | 5.6% |
D2 | 12.1%† | 23.0% | 4.9%† | 10.5%† | 6.5%† | 18.3%†§ | 2.1%† |
D3 | 11.1% | 5.7%* | 13.1% | 5.2% | 12.2% | 6.9%§ | 11.1% |
D4 | 15.2% | 24.7%* | 11.4% | 49.4% | 6.3% | 15.2%§ | 12.2% |
D5 | 15.3% | 9.70%* | 16.1% | 2.3% | 31.2% | 21.2%§ | 9.7% |
D6 | 8.8%‡ | 11.5%*‡ | 4.7%‡ | 4.2%‡ | 8.3%‡ | 16.4% | 2.0%‡ |
D7 | 22.3% | 13.00%* | 40.9% | 21.5% | 23.3% | 11.7%§ | 57.3% |
Abbreviations: ABC, approximate Bayesian computation; ABC-RF, ABC random forest; D, proportion of case in which the model choice procedure was able to select a scenario as the most probable with non-overlapping confidence intervals of the posterior probabilities of each scenario; Post. Prob., relative posterior probability for each scenario; s.d., s.d. over 10 replicate analyses.
The number of random forest votes of each scenario was averaged over 10 replicate analyses. For the ABC-RF analysis, the posterior probability and prior error rates of the best scenario were averaged over 10 replicate analyses. Type I or α error rates (risk to exclude the focal scenario when it is the true one) for scenario 2 and scenario 6 are indicated with ‘†’ and ‘‡’, respectively. Type II or β error rates (risk under scenario 2 (here: 9.1%) is marked with ‘*’ and under scenario 6 ‘§’. Demographic scenarios are shown in Figure 2.