Table 1.
Salmonella Typhimurium strains belonging to the same phage type show different CRISPR/CRISPOL type
| Phage type | Isolate ID (source) | Lab | Accession Number | CRISPR type | CRISPOL type | References |
|---|---|---|---|---|---|---|
| DT1 | DT1 (Clinical isolate) | Wellcome Trust Sanger Institute | aTraces-0ajzxba (ERS007598) | 8579 | 430 | [2] |
| TM 68-619 (Clinical isolate) | Institut Pasteur | Traces-0MviFiU | 2536 | 54 | Enterobase | |
| TM 65-111 (Clinical isolate) | Institut Pasteur | Traces-0BvXZSr | 7387 | 90 | Enterobase | |
| DT10 | MS34 (Control DT10) | NSSLRL | bTraces-0eeFHtx (PRJEB18673) | 9509 | 1629 | This study |
| S81-784 (Clinical isolate) | Institut Pasteur | Traces-0bXCHix | 9913 | 1688 | Enterobase | |
| DT15a | MS41 (Control DT15a) | NSSLRL | bTraces-0FVsVub (PRJEB18673) | 9517 | 1634 | This study |
| S81-798 (Clinical isolate) | Institut Pasteur | Traces-0QWCSHz | 9916 | 1756 | Enterobase | |
| DT41 | M11-2004 (Control DT41) | NSSLRL | bTraces-0hioJez (PRJEB18673) | 9513 | 1630 | This study |
| CQ 41 (Clinical isolate) | Institut Pasteur | Traces-0BkvapO | 7434 | 223 | Enterobase | |
| S02-0321 (Clinical isolate) | Institut Pasteur | Traces-0JWTeTs | 9929 | 1766 | Enterobase |
aAccession Numbers in Enterobase of clinical isolates of S. Typhimurium used in this study. The Accession Number in ENA for each isolate is also provided
bAccession Numbers in Enterobase of control phage types of S. Typhimurium sequenced in this study. The Accession Number in ENA is also provided