Summary of mouse knockout and lineage studies on candidate molecules in liver stem cells/cancer stem cells. Data were obtained from the Mouse Genome Informatics Database. Wnt/Axin: no liver phenotypes were observed, but 65 other phenotypes observed, including limb, kidney, and intestine. β‐catenin: 341 phenotypes were also observed, including bone and intestinal abnormalities. No liver phenotypes were observed. CD133: phenotypes observed included retinitis pigmentosa and retinal degeneration (137). EpCam: no liver abnormalities were observed, but small intestinal and trophoblast abnormalities were observed. Sox9: No liver phenotypes were observed, but 184 other phenotypes were observed, including bone, pancreas, and eye abnormalities. LGR5: 12 phenotypes were observed, including intestinal abnormalities, distended abdomen and neonatal death. In contrast, TGF‐β members display definitive foregut‐liver lineage and multiple liver cancer phenotypes. Smad4: 154 phenotypes were observed including ectoderm, mesoderm, no primitive foregut and multiple gastrointestinal cancers. Smad2/Smad3, β2SP: multiple liver and gastrointestinal abnormalities, and cancers were observed. (M = marker).