Table 4.
Number of genes associated with general COG functional categories
| Code | Value | %age | Description |
|---|---|---|---|
| J | 161 | 2.41 | Translation, ribosomal structure and biogenesis |
| A | 3 | 0.04 | RNA processing and modification |
| K | 375 | 5.61 | Transcription |
| L | 162 | 2.43 | Replication, recombination and repair |
| B | 2 | 0.03 | Chromatin structure and dynamics |
| D | 32 | 0.48 | Cell cycle control, Cell division, chromosome partitioning |
| V | 61 | 0.91 | Defense mechanisms |
| T | 235 | 3.52 | Signal transduction mechanisms |
| M | 236 | 3.53 | Cell wall/membrane biogenesis |
| N | 126 | 1.89 | Cell motility |
| U | 42 | 0.63 | Intracellular trafficking and secretion |
| O | 168 | 2.52 | Posttranslational modification, protein turnover, chaperones |
| C | 270 | 4.04 | Energy production and conversion |
| G | 247 | 3.70 | Carbohydrate transport and metabolism |
| E | 445 | 6.66 | Amino acid transport and metabolism |
| F | 79 | 1.18 | Nucleotide transport and metabolism |
| H | 152 | 2.28 | Coenzyme transport and metabolism |
| I | 182 | 2.72 | Lipid transport and metabolism |
| P | 197 | 2.92 | Inorganic ion transport and metabolism |
| Q | 97 | 1.45 | Secondary metabolites biosynthesis, transport and catabolism |
| R | 412 | 6.17 | General function prediction only |
| S | 329 | 4.93 | Function unknown |
| – | 2615 | 40.14 | Not in COGs |
The total is based on the total number of protein coding genes in the genome based on BASys gene prediction