Table 1.
Strain | Serotype | Source | Target gene | ||
---|---|---|---|---|---|
Z3276 | stx1 | stx2 | |||
EC1275 | O157:H7 | CDC EDL933, hamburger meat | + | + | + |
EC1225 | O157:H7 | WA, 1993 | + | + | + |
EC1759 | O157:H7 | USA (MI), 2003 | + | + | + |
EC1429 | O157:H7 | Denmark, 1987 | + | - | + |
EC4420 | O157:H7 | NY, 12/2006 | + | - | + |
EC4421 | O157:H7 | White Onions, NY, 12/2006 | + | + | + |
EC4422 | O157:H7 | White Onions, NY, 12/2006 | + | + | + |
EC4504 | O157:H7 | MN, 12/2006 | + | + | + |
EC1428 | O157:H7 | Argentina, 1977 | + | - | + |
EC1738 | O157:H7 | Food isolate | + | - | + |
EC1530 | O157:H7 | Thailand, 1994 | + | - | + |
EC4440 | O157:H7 | CDC | + | + | + |
EC4163 | O157:H7 | USA (IL) | + | - | + |
EC4438 | O157:H7 | CDC | + | - | + |
EC4431 | O157:H7 | NY, 12/2006 | + | - | + |
EC4452 | O157:H7 | USA (NJ), 2006 | + | - | + |
EC1709 | O157:H7 | USA (MI), 2002 | + | - | + |
EC1760 | O157:H7 | USA (MI), 2004 | + | - | + |
EC1431 | O157:H7 | Japan, 1987 | + | - | + |
EC4115 | O157:H7 | Sep-06 | + | - | + |
EC1734 | O157:H7 | MA, 2009 | + | - | + |
EC4302 | O157:H7 | NY, 12/2006 | + | + | + |
EC4301 | O157:H7 | NY, 12/2006 | + | + | + |
EC4429 | O157:H7 | NY, 12/2006 | + | - | + |
EC4428 | O157:H7 | NY, 12/2006 | + | - | + |
EC4437 | O157:H7 | NJ, 12/2006 | + | - | + |
EC4436 | O157:H7 | NJ, 12/2006 | + | - | + |
EC4434 | O157:H7 | NY, 12/2006 | + | - | + |
EC4433 | O157:H7 | NY, 12/2006 | + | - | + |
EC4432 | O157:H7 | NY, 12/2006 | + | - | + |
EC4449 | O157:H7 | NJ, 12/2006 | + | - | + |
EC4448 | O157:H7 | WI, 12/2006 | + | - | + |
EC4447 | O157:H7 | CA, 12/2006 | + | + | + |
EC4201 | O157:H7 | USA (CA), 2006 | + | - | + |
EC4456 | O157:H7 | USA (NJ),2006 | + | - | + |
EC4461 | O157:H7 | USA (NJ),2006 | + | - | + |
EC4502 | O157:H7 | USA (NJ),2006 | + | + | + |
EC4503 | O157:H7 | USA (NJ),2006 | + | + | + |
EC4505 | O157:H7 | USA (NJ),2006 | + | + | + |
EC4511 | O157:H7 | USA (NJ),2006 | + | + | + |
EC4200 | O157:H7 | USA (CA), 2006 | + | - | + |
EC1267 | O157:H7 | USA, (NH), 1991 | + | + | + |
EC1268 | O157:H7 | USA (MT), 1991 | + | + | + |
EC4194 | O157:H7 | USA (CA), 2006 | + | - | + |
EC1590 | O157:H7 | USA (WA) | + | + | + |
EC4458 | O157:H7 | USA (NJ),2006 | + | - | + |
EC4197 | O157:H7 | USA (CA), 2006 | + | - | + |
EC1231 | O157:H7 | USA (WA), 1995 | + | + | + |
EC4470 | O157:H7 | USA (NJ),2006 | + | - | + |
EC4471 | O157:H7 | USA (NJ),2006 | + | - | + |
EC1244 | O157:H7 | USA (GA), 1992 | + | + | + |
EC4199 | O157:H7 | USA (CA), 2006 | + | - | + |
EC1260 | O157:H7 | USA (GA),1993 | + | - | + |
EC4167 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4168 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4193 | O157:H7 | USA (OH), 2006 | + | - | + |
EC1265 | O157:H7 | USA (CA), 1993 | + | + | + |
EC4184 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4204 | O157:H7 | USA (CA), 2006 | + | - | + |
EC4171 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4205 | O157:H7 | USA (CA), 2006 | + | - | + |
EC4206 | O157:H7 | USA (CA), 2006 | + | - | + |
EC1593 | O157:H7 | USA (MI), 2003 | + | + | + |
EC1239 | O157:H7 | USA (NE), 1993 | + | - | + |
EC4174 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4187 | O157:H7 | USA (CT), 2006 | + | - | + |
EC4188 | O157:H7 | USA (CT), 2006 | + | - | + |
EC4191 | O157:H7 | Spinach, USA (IL), 2006 | + | - | + |
EC1276 | O157:H7 | Japan, 1996 | + | + | + |
EC4501 | O157:H7 | MN, 12/2006 | + | + | + |
EC558 | O157:H7 | Patient raw milk | + | + | + |
EC867 | O157:H7 | USDA-FSIS-380-94 | + | + | + |
EC874 | O157:H7 | Apple cider | + | + | + |
EC4162 | O157:H7 | Feces (New Jersey) | + | - | + |
EC506 | O157:H7 | Feces | + | - | + |
EC507 | O157:H7 | Feces | + | + | + |
EC4443 | O157:H7 | CDC | + | + | + |
EC4442 | O157:H7 | CDC | + | + | + |
EC4441 | O157:H7 | CDC | + | + | + |
EC4451 | O157:H7 | NJ, 12/2006 | + | - | + |
EC4445 | O157:H7 | NJ, 12/2006 | + | + | + |
EC4446 | O157:H7 | NJ, 12/2006 | + | + | + |
EC1601 | O157:H7 | USA (MI), 2002 | + | + | + |
EC1727 | O157:H7 | MI, 2002 | + | + | + |
EC1426 | O157:H7 | Canada, 1988 | + | - | + |
EC4419 | O157:H7 | NY, 12/2006 | + | - | + |
EC4418 | O157:H7 | NY, 12/2006 | + | - | + |
EC4417 | O157:H7 | NY, 12/2006 | + | - | + |
EC4416 | O157:H7 | NY, 12/2006 | + | - | + |
EC4423 | O157:H7 | NY, 12/2006 | + | - | + |
EC4424 | O157:H7 | NY, 12/2006 | + | - | + |
EC4427 | O157:H7 | NY, 12/2006 | + | - | + |
EC4426 | O157:H7 | NY, 12/2006 | + | - | + |
EC4435 | O157:H7 | NY, 12/2006 | + | - | + |
EC4425 | O157:H7 | NY, 12/2006 | + | - | + |
EC4164 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4439 | O157:H7 | MS, 12/2006 | + | - | + |
EC4450 | O157:H7 | NJ, 12/2006 | + | - | + |
EC1217 | O157:H7 | 2003 | + | + | + |
EC1577 | O157:H7 | USA (WA), 1995 | + | + | + |
EC4201 | O157:H7 | USA (CA), 2006 | + | - | + |
EC4207 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4208 | O157:H7 | Spinach, USA (IL), 2006 | + | - | + |
EC1245 | O157:H7 | USA (GA), 1995 | + | + | + |
EC4506 | O157:H7 | USA (MN), 2006 | + | + | + |
EC4507 | O157:H7 | USA (MN), 2006 | + | + | + |
EC4508 | O157:H7 | USA (MN), 2006 | + | + | + |
EC4509 | O157:H7 | USA (MN), 2006 | + | + | + |
EC4510 | O157:H7 | USA (MN), 2006 | + | + | + |
EC1590 | O157:H7 | USA (WA) | + | + | + |
EC1597 | O157:H7 | USA (CT), 1996 | + | + | + |
EC1225 | O157:H7 | USA (WA), 1993 | + | + | + |
EC1236 | O157:H7 | Food, USA (CA), 1993 | + | + | + |
EC1240 | O157:H7 | USA (OH), 1993 | + | + | + |
EC1241 | O157:H7 | Food, USA (OR), 1995 | + | + | + |
EC4472 | O157:H7 | USA, (NJ), 2006 | + | - | + |
EC1242 | O157:H7 | USA (GA), 1992 | + | - | + |
EC1243 | O157:H7 | USA (GA), 1992 | + | + | + |
EC4463 | O157:H7 | USA (NJ), 2006 | + | - | + |
EC4165 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4166 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4195 | O157:H7 | Spinach, USA (OH), 2006 | + | - | + |
EC4192 | O157:H7 | USA (CA), 2006 | + | - | + |
EC4182 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4469 | O157:H7 | USA (NJ), 2006 | + | - | + |
EC4465 | O157:H7 | USA (NJ), 2006 | + | - | + |
EC4170 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4183 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4186 | O157:H7 | USA (IL), 2006 | + | - | + |
Ec4169 | O157:H7 | USA (WI), 2006 | + | - | + |
EC4189 | O157:H7 | USA (CT), 2006 | + | - | + |
EC4175 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4176 | O157:H7 | USA (IL), 2006 | + | - | + |
EC4444 | O157:H7 | USA, NJ, 2006 | + | + | + |
EC4173 | O157:H7 | USA (IL), 2006 | + | - | + |
EC1892 | O104:H4 | STEC, Republic of Georgia, 2011 | - | - | + |
EC1893 | O104:H4 | STEC, Republic of Georgia, 2011 | - | - | + |
EC1891 | O104:H4 | STEC, Germany, 2011 | - | - | + |
EC1894 | O104:H4 | STEC, Germany, 2011 | - | - | + |
EC1769 | O26 | STEC | - | + | - |
EC1770 | O26 | STEC | - | + | + |
EC1771 | O26 | STEC | - | + | - |
EC1773 | O26:H11 | STEC | - | + | - |
EC1775 | O26:H11 | STEC | - | + | - |
EC1768 | O26:H2 | STEC | - | + | - |
EC1786 | O111:NM | STEC | - | + | + |
EC1787 | O111:H8 | STEC | - | + | + |
EC1788 | O111:NM | STEC | - | + | - |
EC1791 | O145:H25 | STEC | - | - | + |
EC1794 | O145:NM | STEC | - | + | + |
EC1801 | O103:H2 | STEC | - | + | - |
EC1802 | O103:H25 | STEC | - | + | - |
EC1803 | O103:H11 | STEC | - | + | + |
EC1806 | O121:H19 | STEC | - | - | + |
EC1807 | O121:H19 | STEC | - | - | + |
EC1808 | O121:H19 | STEC | - | + | + |
EC331 | O26 | STEC | - | + | + |
EC400 | O26:H11 | STEC | - | + | + |
EC521 | O26:H11 | STEC | - | + | + |
EC540 | O26:H- | STEC | - | + | + |
EC550 | O26:H- | STEC | - | + | + |
EC1232 | O55:H7 | STEC | - | + | + |
EC1235 | O55:H7 | STEC | - | + | + |
EC1668 | O111:H8 | STEC | - | + | - |
EC1669 | O118:H16 | STEC | - | - | + |
EC1631 | O111:H8 | STEC | - | + | - |
EC1655 | O111:H8 | STEC | - | + | - |
K12 | Negative E. coli strain control | - | - | - | |
NTC | - | - | - |