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. Author manuscript; available in PMC: 2018 Nov 9.
Published in final edited form as: J Phys Chem B. 2017 Oct 31;121(44):10228–10241. doi: 10.1021/acs.jpcb.7b08045

Table 2.

Biophysical properties of the β-barrel proteins used in this study.67

Proteina pI/Charge state GRAVYc Aliphatic indexd Negative residues Positive residues Total number of residuese
WT-OmpG 4.4/acidic −0.798 55.87 55 22 281
FhuA ΔC/Δ5Lb 5.7/acidic −0.550 60.42 57 48 505
FhuA ΔC/Δ5L_25N 9.3/basic −0.563 58.31 34 43 473
FhuA ΔC/Δ7L_30N 9.6/basic −0.574 57.42 27 42 426
a

All proteins have a 6His+ tag at the C terminus.

b

This engineered FhuA includes a 33-residue signal peptide at the N terminus.

c

The GRAVY hydrophobicity parameter was calculated by adding individual hydropathy indexes68 of each residue and dividing by the total number of residues. Increasing positive GRAVY number shows a more hydrophobic protein.

d

The aliphatic index is given by the relative volume of aliphatic chain-containing residues.69

e

The total number of residues includes those amino acids from the Gly/Ser-rich containing polypeptide loop and 6×His+ tag.