Table 5.
Summary of consequences predicted by the variant effect predictor, for directional FST outliers detected by lositan from immunome sequence capture of Myotis lucifugus samples (n = 92)
Feature | Consequence | Geography | WNS |
---|---|---|---|
Exon | Synonymous variant | 36 | 43 |
Exon | Missense variant | 21 | 26 |
Exon | Missense variant, splice region variant | 2 | 2 |
Exon | Splice region variant, synonymous variant | 1 | 1 |
Intron | Intron variant | 157 | 122 |
Intron | Splice region variant, intron variant | 2 | 8 |
Intron | Splice donor variant | 0 | 1 |
Regulatory Region | Upstream gene variant | 109 | 96 |