Table 1.
Eighteen strains of Pythium insidiosum used for generation of the rDNA-based phylogenetic tree. Strain identification numbers, reference numbers, host sources, geographic origins, assigned phylogenetically-distinct clades, and accession numbers of the rDNA sequences of all strains are summarized in the table. ‘*’ indicates the strains, including Pi45, where genome sequences are publically available.
| ID | Reference ID | Source | Country of origin | Clade | Accession number |
|---|---|---|---|---|---|
| Pi05 | CBS 575.85 | Equine | Costa Rica | I | AB971178 |
| Pi06 | CBS 574.85 | Equine | Costa Rica | I | AB971179 |
| Pi07 | CBS 573.85 | Equine | Costa Rica | I | AB971180 |
| Pi08 | CBS 580.85 | Equine | Costa Rica | I | AB898107 |
| Pi09 | CBS 101555 | Equine | Brazil | I | AB971181 |
| Pi10* | ATCC 200269 | Human | USA | I | AB898108 |
| Pi35* | Pi-S | Human | Thailand | II | AB898124 |
| Pi36 | ATCC 64221 | Equine | Australia | II | LC199883 |
| Pi37 | ATCC 28251 | Equine | Papua New Guinea | II | LC199884 |
| Pi38 | CBS 101039 | Human | India | II | AB898125 |
| Pi39 | CBS 702.83 | Equine | Japan | II | LC199885 |
| Pi42 | CR02 | Environment | Thailand | II | AB971184 |
| Pi44 | MCC 17 | Human | Thailand | III | AB971185 |
| Pi45* | MCC 13 | Human | Thailand | III | AB971186 |
| Pi46 | SIMI 3306-44 | Human | Thailand | III | AB971187 |
| Pi47 | SIMI 2921-45 | Human | Thailand | III | AB971188 |
| Pi48 | SIMI 4763 | Human | Thailand | III | AB971189 |
| Pi50 | ATCC 90586 | Human | USA | III | AB971190 |