Table 3.

Secretome of strains THCO2-90 and gldG::Tn identified by LC-MS/MS analysis of cell-free supernatant^a.

					Spectrum count averagese
Locus tag	Gene	Predicted functionb	CTDc	Ratio TH/gldGd	TH	gldG::Tn
THC0290_0237	fpp1	Psychrophilic metalloprotease Fpp1 precursor	TIGR04183	Absent	17.33	0.00
THC0290_0944		Probable S8 subtilisin family serine endopeptidase precursor	TIGR04183	Absent	7.00	0.00
THC0290_1048		Protein of unknown function precursor, putative adhesin	TIGR04131	Absent	5.67	0.00
THC0290_0171		Probable cell surface protein (Leucine-rich repeat protein) precursor	TIGR04183	Absent	8.33	0.00
THC0290_2147	gldJ	Gliding motility lipoprotein precursor GldJ		40.57	94.67	2.33
THC0290_1520		Probable endonuclease precursor	TIGR04183	32.00	10.67	0.33
THC0290_0174		Probable cell surface protein (Leucine-rich repeat protein) precursor	TIGR04183	24.00	8.00	0.33
THC0290_0740	gldK	Gliding motility lipoprotein precursor GldK		17.40	58.00	3.33
THC0290_2201		Protein of unknown function precursor, putative adhesin		15.50	10.33	0.67
THC0290_0743	gldN	Gliding motility protein precursor GldN		13.29	62.00	4.67
THC0290_1047		Protein of unknown function precursor, putative adhesin	TIGR04131	13.00	4.33	0.33
THC0290_0500		Probable S8 and S53 subtilisin family serine endopeptidase precursor		10.53	52.67	5.00
THC0290_1615		Protein of unknown function		10.29	24.00	2.33
THC0290_1494		Probable ribonuclease	TIGR04183	10.25	13.67	1.33
THC0290_0129		Putative outer membrane protein precursor	TIGR04183	8.50	22.67	2.67
THC0290_0175		Probable cell surface protein (Leucine-rich repeat protein)	TIGR04183	7.75	10.33	1.33
THC0290_0238	fpp2	Psychrophilic metalloprotease Fpp2 precursor	TIGR04183	6.15	67.67	11.00
THC0290_2158		Uncharacterized protein precursor. Probable phage protein.		6.00	18.00	3.00
THC0290_0754		Protein of unknown function precursor, putative adhesin		5.62	24.33	4.33
THC0290_1616		Protein of unknown function precursor, putative adhesin	TIGR04131	5.56	16.67	3.00
THC0290_0300		Probable M36 fungalysin family metalloprotease precursor	TIGR04183	5.40	9.00	1.67

^aProteins which relative abundance changed at least ±2-fold significantly (p < 0.01) and for which at least 3 spectra have been identified in one of analyzed strain (full data available in Table S1).

^bProteins annotation as previously described (Rochat et al., 2017a).

^cCTD type identified by BLASTP analysis.

^dProtein abundance ratio calculated using spectral counts.

^eAverage number of spectral counts calculated using triplicates values for each strain.