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. 2017 Nov 7;8:797. doi: 10.3389/fphar.2017.00797

Table 3.

Knowledge-base of genotype profile of Taxane treatment good/bad responding patients.

PGx Profile ABCB1 alias MDR1 CYP2C8*3 CYP3A4*1B XRCC3 Effects
Rs#code Nucleotide Codon rs104564 23435C>T I1145I rs2032582 2677G>T/A A893S rs10509681 771 A>G# K399R rs2740574 −392A>G 5′UTR rs1799794 316A>G T241M
MAF* T = 0.566 A = 0.43 T = 0.01 G = 0.131 G = 0.015 A = 0.27 Referred to Caucasian Population
Genotype A CC GG TT AA AA Lower neurotoxicity, due to wild type polymorphisms
Genotype B CT GT/A CT or TT AG or GG AG PM for CYP2C8*3, probable toxicity
Genotype C TT TT/AA CT or TT AG or GG AG or GG Very high risk of cumulative Neuropathy caused by high plasma level of taxane due to PM profiles (CYP2C8* and CYP3A4*22) and low high extrusion from the cells (ABCB1). In addition, probable acute neutropenia (XRCC3)
*

MAF, Minor Allele Frequency. PM, poor Metabolizer; source: www.ensembl.org/Multi/Search/Results?q=MAF;_site=ensembl;_page=1;_facet_feature_type=Gene.

#

Design of the primers and probes were made on complementary DNA strand (T > C).

PM, Poor Metabolizer.