. 2017 Oct 19;40(10):714–730. doi: 10.14348/molcells.2017.2297

Table 1.

Summary of loci in IRGSP v1.0 and design features of the rice ASDM

Chr	Loci	Alternative loci^a)	Alternative transcript^b)	Total transcripts^c)	Designed loci^d)	Designed alternative loci^e)	Designed alternative transcripts^f)	Designed total_transcripts^g)
Os01	5,273	778	1,765	6,260	5,070	522	1,093	5,641
Os02	4,216	642	1,464	5,038	4,056	423	908	4,541
Os03	4,550	761	1,735	5,524	4,407	478	1,010	4,939
Os04	3,359	473	1,083	3,969	3,200	347	729	3,582
Os05	3,027	437	985	3,575	2,914	284	610	3,240
Os06	3,159	406	919	3,672	3,042	278	592	3,356
Os07	2,870	362	829	3,337	2,753	260	547	3,040
Os08	2,588	350	799	3,037	2,456	241	514	2,729
Os09	2,111	285	641	2,467	2,012	205	434	2,241
Os10	2,115	260	582	2,437	1,981	174	369	2,176
Os11	2,424	247	543	2,720	2,240	161	340	2,419
Os12	2,176	253	593	2,516	2,045	166	356	2,235

Summary	37,868	5,254	11,938	44,552	36,176	3,539	7,502	40,139

RAP-DB annotation based on the genome IRGSP_1_0_representative_2014_06_25 was used

^a)

The number of loci with alternatively spliced transcripts

^b)

The number of transcripts due to alternative splicing at these loci

^c)

The total number of transcripts, both single and alternatively spliced transcript(s)

^d)

The number of loci included in this ASDM

^e)

The number of loci with alternative splicing included in this ASDM

^f)

The number of transcripts with alternative splicing included in this ASDM

^g)

The number of transcripts with single or alternative splicing included in this ASDM