Table 3.

Summary of genotyping results from three molecular markers analysed in 37 field samples

Marker	He	Mean MOI	Number SNPsa	Number Haplotypes	Concordance of MOI Κ
msp2 CE	0.948	2.19	NA	25	Reference
cpmp	0.957	2.41	45	27	0.71b (good)
csp	0.574	1.54	10c	4	0.38d (poor)

^a With respect to the reference sequence of P. falciparum strain 3D7

^b Cohen’s Kappa (2 raters, weights = equal): z = 6.64, p-value = 3.04e-11

^c 4/10 SNPs are fixed within these 37 field samples

^d Cohen’s Kappa (2 raters, weights = equal): z = 4.48, p-value = 7.61e-6