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. 2017 Sep 14;292(45):18660–18671. doi: 10.1074/jbc.M117.812545

Table 2.

Primers used in this study

oePCR, overlap extension PCR.

Name Sequence Restriction site Purpose
PfA506-4424-F1-MR ATAGCCGGATCCTAGACAGGTAGCGCCAAATCACG BamHI Forward primer for ptaA left flanking region
PfA506-4424-R1-MR AGGAGTAGTCACCATGGTGCGTGTCACGCAGGTGGTCTGATCAGGCGGCGCTATAGCTG Reverse primer for ptaA left flanking region
PfA506-4424-F2-MR GACACGCACCATGGTGACTACTCCTTG Forward primer for ptaA right flanking region
PfA506-4424-R2-MR GGCCGCGAATTCTTTGTACAGATTCTTGATTTCCATCTTG EcoRI Reverse primer for ptaA right flanking region
PfA506-4424-DF-MR TTTGAGTGCTGCGCCTATTG ptaA genomic deletion control primer
PfA506-4424-DR-MR CGCGGCAATGCTGGTGAAGATATAG ptaA genomic deletion control primer
PfA506-4424-F-MR TCATCGCATATGGTGCGTGTCAGTCGTCGATCC NdeI Forward primer for cloning PtaA-coding region into pEXH5
PfA506-4424-strep-R-MR GGCCGCAAGCTTTTACTTTTCGAACTGCGGGTGGCTCCAGACCACCTGCGTCGCAAAGGCCTCGC HindIII Reverse primer for cloning PtaA-coding region into pEXH5
PfA506-4424_K224A-F-MR CTGGTGCTGCGCACCTTCTCCGCCATCTAC Primer for K224A exchange by oePCR
PfA506-4424_K224A-R-MR CCGGCCATGCCGTAGATGGCGGAGAAGGTG Primer for K224A exchange by oePCR
PfA506-mat4424-F-MR GATATACATATGAGCCCAGCGCCGACAAAATCTGACC NdeI Forward primer for cloning mature PtaA-coding region into pEXH5
pEXH5-RBS-F-MR GGCGCGGGATCCGTTTAACTTTAAGAAGGAGATATAC BamHI Forward primer for subcloning from pEXH5 into pME6010
pEXH5-strep-term-HindIII-R-MR CCCCTTAAGCTTAAAAAAAACCCCGCCCTGTCAGGGGCGGGGTTTTTTTTTTTACTTTTCGAACTGCGGGTGGCTCC HindIII Reverse primer for subcloning from pEXH5 into pME6010