Table 2.

Comparison of 37 BJ04 amino acid (AA) sequences with homologous sequences encoded by the 5 prototype viruses.

BJ04 amino acid analysisa	Numberb,c	Percentage (%)b
Overall number of amino acids (37 ORFs)	11540	/
BJ04 residues conserved in all prototype sequences	10696	92.7
BJ04 residues specific to prototype type 2 sequence	147	17.4
Type 2 residues found in another prototype sequence	643	76.2
BJ04 residues found in other prototype sequence (not type 2)	29	3.4
BJ04 residues not found in any prototype sequences	25	3

Note: ^aGB annotations were harmonized based on NC_001405 type 2 annotation.

^bThe number and percentage of BJ04 amino acid residues that are not conserved in all prototype sequences are indicated. As BJ04 is highly related to type 2 prototype, the comparison was done in reference to type 2 sequences.

^cSupplementary Table 5 was used to generate the numbers.