Table 3.

Biological process (GO) enrichment analysis in networks.

Expression	#Pathway ID	Pathway description	Observed gene count	False discovery rate
Upregulated	GO.0002376	Immune system process	321	7.44E − 63
	GO.0006952	Defense response	252	5.46E − 56
	GO.0002682	Regulation of immune system process	246	8.58E − 56
	GO.0006955	Immune response	241	2.11E − 55
	GO.0050776	Regulation of immune response	175	4.95E − 49
Downregulated	GO.0007010	Cytoskeleton organization	109	2.81E − 12
	GO.0016043	Cellular component organization	386	2.81E − 12
	GO.0048522	Positive regulation of cellular process	362	2.81E − 12
	GO.0051128	Regulation of cellular component organization	211	6.71E − 12
	GO.0071840	Cellular component organization or biogenesis	390	1.02E − 11