Table 2.
Summary of results using Roche 454 GS Junior Pyrosequencing of virome, OTUs and diversity indices calculated from the sequencing reads
Collection site | No. of reads | No. of OTUs | Shannon–Weaver | Inverse simpson |
---|---|---|---|---|
Camarines Norte | 9098 | 314 | 0.994 | 1.400 |
Quezon | 978 | 945 | 1.000 | 2.000 |
Leyte | 793 | 778 | 1.946 | 2.350 |
Pangasinan | 281 | 271 | 1.663 | 1.943 |
Cagayan | 419 | 419 | 3.006 | 7.258 |
Zamboanga del Sur | 836 | 822 | 3.379 | 9.800 |