Table 2. Quality control metrics for sequencing runs on ONDRISeq.
| Parameters | Mean (±s.d.) | Best performance | Poorest performance |
|---|---|---|---|
| Cluster density (×103/mm2) | 1433.6 (±165) | 1320 | 1835 |
| Target size (bp) | 971,388 | 971,388 | 971,388 |
| Total reads (×106) | 29.8 (±2.5) | 29.1 | 35.6 |
| Reads PF (×106) | 22.8 (±0.9) | 24.1 | 22.1 |
| Reads PF (%) | 77 (±5.8) | 83 | 62 |
| Targets bases ⩾30 (%) | 92.0% | 95.3 | 84.9 |
| Mean target coverage | 76 (±18) | ||
| Max target coverage | 259 | ||
| Min target coverage | 0 |
Abbreviation: PF, passed quality filter.
Mean of 9 runs. Blank spaces represent ‘not applicable’.