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. 2017 Nov 2;11(11):e0006030. doi: 10.1371/journal.pntd.0006030

Table 2. The indicators of genetic diversity and neutrality tests in the populations of O. viverrini from three villages using cox1 sequences.

Populations No.
of samples
Haplotype S Genetic diversity Neutrality tests
Hd Pi Tajima' s D
(p value)
Fu's Fs
(p value)
Na-Yao 19 12 28 0.871 0.031 +/ 0.016 1.418* 0.238*
Thoong-Heang 18 8 26 0.824 0.026 +/-0.013 0.810* 2.751*
Na-Ngam 19 8 9 0.614 0.009 +/-0.005 -0.359* -0.515*
Reference isolates 15 3 5 0.514 0.003 +/- 0.002 -0.657* 1.412*
Total populations 69 29 55 0.892 0.024 +/- 0.012 -0.761* -4.048*

S = no. of segregation sites (polymorphic), Hd = haplotype diversity, Pi = nucleotide diversity. Statistical significance: p < 0.05.

* p>0.05, not significantly different.