Table 4. Number of polypeptides queried in various molluscs and matches with B. pfeifferi TransDecoder-predicted ORFs.
Reference | # Reference polypeptides | B. pfeifferi polypeptides matched to reference polypeptides | Download location |
---|---|---|---|
Biomphalaria glabrata v1.0 [37] | 36,675 | 127,626 | https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Biomphalaria_glabrata/100/ |
Aplysia californica v3.0* | 27,591 | 99,884 | http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Aplysia_californica/101/ |
Lottia gigantea v1.0 [78] | 188,590 | 74,494 | http://genome.jgi.doe.gov/Lotgi1/Lotgi1.download.ftp.html |
Pinctada fucata v2.0 [79] | 31,477 | 77,341 | http://marinegenomics.oist.jp/pearl/viewer/download?project_id=36 |
Crassostrea gigas v9 [80] | 45,406 | 80,505 | ftp://ftp.ncbi.nlm.nih.gov/genomes/Crassostrea_gigas/ |
Octopus bimaculoides v2.0 [81] | 38,585 | 71,395 | http://genome.jgi.doe.gov/pages/dynamicOrganismDownload.jsf?organism=Metazome |
*Genome is publicly available at link provided